G99288



Basic Information


Item Value
gene id G99288
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10075701 ~ 10076012 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU112993
CTCGTGTCCTTGTGGTCCAGGGCTCGTCACAGCAGGGGAGATGAAAATCATAATGATGAGAATCATGTTTTTGGGCTTTTTGCCACTTAATATTGACAGGATAGTGGGCAGAGGACAAAAACCGGATCTGCAAATGCTGCAGATTTTAATGCTTGCTGGCCACAGGAGAACCATGGTCCAATATGATGGAGTATGCGACCTAACCCATAGGTTACAGCACAGGTGAGAAACTTATTTAAAATGCAGCAGGTTTCTGGTCTATAGATATGGCTCAGGCTACTTCTTCAGTGCCTTCTTCTCCTGTTTTATTGT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU112993 True 312 lncRNA 0.44 1 10075701 10076012

Neighbor


gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 23334 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 74980 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 120373 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 172819 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 189468 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 257865 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 259246 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 344563 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 432452 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 511187 10587199 ~ 10588775 (+)
G99287 NA non-coding upstream 1035 10074350 ~ 10074666 (+)
G99284 NA non-coding upstream 5353 10070119 ~ 10070348 (+)
G99283 NA non-coding upstream 5585 10069905 ~ 10070116 (+)
G99281 NA non-coding upstream 7095 10068244 ~ 10068606 (+)
G99289 NA non-coding downstream 227 10076239 ~ 10076512 (+)
G99293 NA non-coding downstream 7815 10083827 ~ 10084034 (+)
G99294 NA non-coding downstream 11112 10087124 ~ 10087501 (+)
G99295 NA non-coding downstream 12049 10088061 ~ 10088282 (+)
G99297 NA non-coding downstream 17743 10093755 ~ 10093983 (+)
G99041 NA other upstream 150047 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 278761 9795950 ~ 9842576 (+)
G98288 NA other upstream 1072984 8996098 ~ 9002717 (+)
G97824 NA other upstream 2059926 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2289978 7783987 ~ 7784996 (+)
G99410 NA other downstream 158388 10234400 ~ 10236851 (+)
G99456 NA other downstream 218379 10294391 ~ 10298904 (+)
G99940 NA other downstream 1595633 11671645 ~ 11672873 (+)
G100178 NA other downstream 2084629 12160641 ~ 12162845 (+)

Expression



Co-expression Network