G99295


Basic Information

Item Value
gene id G99295
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10088061 ~ 10088282 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113000
CTCAAACGGAAGGTGGAGGAGCGCAAGGTCTCTAACATTCACCAGCTCCGTGATGTCGTCATGGAGGAGTGGAAGAGGACTCCAGTGGCAACCTGTGAAGCTCTGGTGAACTCCATGCCCAAGAGGGTCAAGGCAGTGCTGGAAAATAATGGTGGCCACACAAAACATTGACACTCTGGGCCCAATTTGGACATTTTCACTTAGGGGTGTACTCACTTTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113000 True 222 lncRNA 0.51 1 10088061 10088282

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 35694 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 87340 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 132733 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 185179 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 201828 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 245595 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 246976 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 332293 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 420182 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 498917 10587199 ~ 10588775 (+)
G99294 NA non-coding upstream 560 10087124 ~ 10087501 (+)
G99293 NA non-coding upstream 4027 10083827 ~ 10084034 (+)
G99289 NA non-coding upstream 11549 10076239 ~ 10076512 (+)
G99288 NA non-coding upstream 12049 10075701 ~ 10076012 (+)
G99287 NA non-coding upstream 13395 10074350 ~ 10074666 (+)
G99297 NA non-coding downstream 5473 10093755 ~ 10093983 (+)
G99306 NA non-coding downstream 16993 10105275 ~ 10105559 (+)
G99307 NA non-coding downstream 17388 10105670 ~ 10105882 (+)
G99309 NA non-coding downstream 18383 10106665 ~ 10106957 (+)
G99311 NA non-coding downstream 26577 10114859 ~ 10115134 (+)
G99041 NA other upstream 162407 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 291121 9795950 ~ 9842576 (+)
G98288 NA other upstream 1085344 8996098 ~ 9002717 (+)
G97824 NA other upstream 2072286 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2302338 7783987 ~ 7784996 (+)
G99410 NA other downstream 146118 10234400 ~ 10236851 (+)
G99456 NA other downstream 206109 10294391 ~ 10298904 (+)
G99940 NA other downstream 1583363 11671645 ~ 11672873 (+)
G100178 NA other downstream 2072359 12160641 ~ 12162845 (+)

Expression


Co-expression Network