G99321


Basic Information

Item Value
gene id G99321
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10176178 ~ 10177001 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113026
TCTTCTTTCTCTATTGTAAGACAGTTTTTTCAGCGAGCCGCACATATTGTACATGTGCTACGCTAAACCCACGGCACATCTTTGATCTCTTGCCCGCTCTTTATGAGAGGTTTGTCGTGAATGTCAGTATAATGGTAATTCTTTCTCTGTAGCTTTAGTTGAGGTATGTTTGGACATTAGAATCAAACTTAGTGAGTTGTCTACCTAGACAGCCATTACATGGGTCAATATATAAAAGTGTCCTTGATAAAGAAAAGAAATGCTTTTACAAAAACACACATGCCGAGTTCTTAGTAATGCACTCTTTGCATTCATGTCGGTTTCATATGGTTCTGAAAAACTTTTAAGGTGATGATACACAGGGCAACTTTTTGAGCAATGTTGCCAGGCAATGTTGCTTGGGCACTTTCCCATTGAGAATGAGCAACAAATTTCTATCTGGATACTTTAGATCGGTCGTGGGCAATTTTTTGAGATCCTCCAATCAGAATGCTAGCAGCCAATCACGTGACCGGCTTGGAGATTTCAGAAAAAAAAAAAAAATCAAACAAGATGGCGGCCTCTCAGCGGCAGTGAAGCAAAGAAAAGGAGAGTGAACTTCTATCTTTTTAGGCTGGTAAGTTGTCATGTGTCAACTCAAAACAAAATTCACCTCATTTAATGTGCATAGGCTGTAATCTAGTCATCGAATGTTTTCAGTTAAATGCTAAAAAGATGCATTCTGTTTAACGTCTGTAGTGGTGTAGGCTGTGGGTGTATGGCACATTAAAGTAGCTTTTGAAGCGATTGATCCAGGTTCGAATCCGCCTTTTGCCAAACTCGCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113026 True 824 lncRNA 0.40 1 10176178 10177001

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 123811 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 175457 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 220850 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 273296 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 289945 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 156876 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 158257 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 243574 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 331463 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 410198 10587199 ~ 10588775 (+)
G99346 NA non-coding upstream 7868 10168045 ~ 10168310 (+)
G99343 NA non-coding upstream 9924 10166038 ~ 10166254 (+)
G99337 NA non-coding upstream 16435 10159526 ~ 10159743 (+)
G99273 NA non-coding upstream 19303 10156652 ~ 10156875 (+)
G99330 NA non-coding upstream 46135 10129828 ~ 10130043 (+)
G99325 NA non-coding downstream 153 10177154 ~ 10177388 (+)
G99324 NA non-coding downstream 843 10177844 ~ 10178160 (+)
G99349 NA non-coding downstream 2105 10179106 ~ 10179418 (+)
G99350 NA non-coding downstream 2692 10179693 ~ 10179930 (+)
G99355 NA non-coding downstream 17835 10194836 ~ 10195285 (+)
G99041 NA other upstream 250524 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 379238 9795950 ~ 9842576 (+)
G98288 NA other upstream 1173461 8996098 ~ 9002717 (+)
G97824 NA other upstream 2160403 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2390455 7783987 ~ 7784996 (+)
G99410 NA other downstream 57399 10234400 ~ 10236851 (+)
G99456 NA other downstream 117390 10294391 ~ 10298904 (+)
G99940 NA other downstream 1494644 11671645 ~ 11672873 (+)
G100178 NA other downstream 1983640 12160641 ~ 12162845 (+)

Expression


Co-expression Network