G99324


Basic Information

Item Value
gene id G99324
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10177844 ~ 10178160 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113029
CAAAAGATCAGCATTTATTTGAAATAGAGATATGTTGTAACATTAAAAAGACCTTAAAAAATTTTTTCTTAAAACTAAGAAAATTAGTTTTAAAAGACCCCAAACTTTGAACAGTAGTGTATTTTTGAAAATAAATAAATGTGCTTCATGCCATTGACCCATATACATGATCACAAACCTTCAAAGCATTTTTGGAAATCAAATTTACTGAACTGCATACCTAGAACCATATGCATGTTTTAATCTTGGAATCAAACTTAGTCAGCTGCCTACATGACAGTATTTTTGGCCATTATATGTGTGTCTCAATAAACTGC

Function

NR:

description
PREDICTED: leucine-rich repeat-containing protein 8C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113029 True 317 lncRNA 0.30 1 10177844 10178160

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 125477 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 177123 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 222516 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 274962 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 291611 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 155717 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 157098 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 242415 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 330304 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 409039 10587199 ~ 10588775 (+)
G99325 NA non-coding upstream 456 10177154 ~ 10177388 (+)
G99321 NA non-coding upstream 843 10176178 ~ 10177001 (+)
G99346 NA non-coding upstream 9534 10168045 ~ 10168310 (+)
G99343 NA non-coding upstream 11590 10166038 ~ 10166254 (+)
G99337 NA non-coding upstream 18101 10159526 ~ 10159743 (+)
G99349 NA non-coding downstream 946 10179106 ~ 10179418 (+)
G99350 NA non-coding downstream 1533 10179693 ~ 10179930 (+)
G99355 NA non-coding downstream 16676 10194836 ~ 10195285 (+)
G99382 NA non-coding downstream 21109 10199269 ~ 10199486 (+)
G99385 NA non-coding downstream 27414 10205574 ~ 10205992 (+)
G99041 NA other upstream 252190 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 380904 9795950 ~ 9842576 (+)
G98288 NA other upstream 1175127 8996098 ~ 9002717 (+)
G97824 NA other upstream 2162069 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2392121 7783987 ~ 7784996 (+)
G99410 NA other downstream 56240 10234400 ~ 10236851 (+)
G99456 NA other downstream 116231 10294391 ~ 10298904 (+)
G99940 NA other downstream 1493485 11671645 ~ 11672873 (+)
G100178 NA other downstream 1982481 12160641 ~ 12162845 (+)

Expression


Co-expression Network