G99350


Basic Information

Item Value
gene id G99350
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10179693 ~ 10179930 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113055
GAAAAATGTTTAGTCGGGGGCAGCCCTAGTAAATACACTATACTAACATGAACTGTTAATAAAACATGGACACTGAGCTTGATAATGGTACTTTTTGGGTATTACATGACTTACTAAATGTAATGTTACATGCTCGTGATTTAATTTGCTCTTTATATATATAGTGTATATATAGTACAAGATTTAGCTTTTCACTTTTAAAGCCCTGCACAATCTTGCACCCTCATCTCTCTCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113055 True 238 lncRNA 0.34 1 10179693 10179930

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 127326 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 178972 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 224365 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 276811 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 293460 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 153947 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 155328 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 240645 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 328534 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 407269 10587199 ~ 10588775 (+)
G99349 NA non-coding upstream 275 10179106 ~ 10179418 (+)
G99324 NA non-coding upstream 1533 10177844 ~ 10178160 (+)
G99325 NA non-coding upstream 2305 10177154 ~ 10177388 (+)
G99321 NA non-coding upstream 2692 10176178 ~ 10177001 (+)
G99346 NA non-coding upstream 11383 10168045 ~ 10168310 (+)
G99355 NA non-coding downstream 14906 10194836 ~ 10195285 (+)
G99382 NA non-coding downstream 19339 10199269 ~ 10199486 (+)
G99385 NA non-coding downstream 25644 10205574 ~ 10205992 (+)
G99387 NA non-coding downstream 30401 10210331 ~ 10210570 (+)
G99390 NA non-coding downstream 34683 10214613 ~ 10214878 (+)
G99041 NA other upstream 254039 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 382753 9795950 ~ 9842576 (+)
G98288 NA other upstream 1176976 8996098 ~ 9002717 (+)
G97824 NA other upstream 2163918 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2393970 7783987 ~ 7784996 (+)
G99410 NA other downstream 54470 10234400 ~ 10236851 (+)
G99456 NA other downstream 114461 10294391 ~ 10298904 (+)
G99940 NA other downstream 1491715 11671645 ~ 11672873 (+)
G100178 NA other downstream 1980711 12160641 ~ 12162845 (+)

Expression


Co-expression Network