G99390


Basic Information

Item Value
gene id G99390
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10214613 ~ 10214878 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113102
ACAACCTCCAATACCCAGAAGTCTTGTGAACACATATTTAGTATTTGTTTTGTGGCCATATTTCAGTGACTTAAGTTTTTTATTTTTTCAATAACCACGCATAAACGTTATTCTCTCAAAAATACAAACATGTACATACATGTTGCTCACATATTATGGTAGCCTAGTTTGTGCTGAATACAGTGAAATGACACTTTTGCCATTAATATGTTTATAAGCAACTGAAAAAAGCACAAATGTCAGGGCATGTCAAAACTTTTCCAGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113102 True 266 lncRNA 0.33 1 10214613 10214878

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 162246 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 213892 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 259285 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 311731 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 328380 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 118999 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 120380 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 205697 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 293586 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 372321 10587199 ~ 10588775 (+)
G99387 NA non-coding upstream 4043 10210331 ~ 10210570 (+)
G99385 NA non-coding upstream 8621 10205574 ~ 10205992 (+)
G99382 NA non-coding upstream 15127 10199269 ~ 10199486 (+)
G99355 NA non-coding upstream 19328 10194836 ~ 10195285 (+)
G99350 NA non-coding upstream 34683 10179693 ~ 10179930 (+)
G99391 NA non-coding downstream 477 10215355 ~ 10215610 (+)
G99392 NA non-coding downstream 1856 10216734 ~ 10216985 (+)
G99393 NA non-coding downstream 2145 10217023 ~ 10217257 (+)
G99394 NA non-coding downstream 2438 10217316 ~ 10217534 (+)
G99395 NA non-coding downstream 6426 10221304 ~ 10222253 (+)
G99041 NA other upstream 288959 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 417673 9795950 ~ 9842576 (+)
G98288 NA other upstream 1211896 8996098 ~ 9002717 (+)
G97824 NA other upstream 2198838 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2428890 7783987 ~ 7784996 (+)
G99410 NA other downstream 19522 10234400 ~ 10236851 (+)
G99456 NA other downstream 79513 10294391 ~ 10298904 (+)
G99940 NA other downstream 1456767 11671645 ~ 11672873 (+)
G100178 NA other downstream 1945763 12160641 ~ 12162845 (+)

Expression


Co-expression Network