G99408


Basic Information

Item Value
gene id G99408
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10232042 ~ 10232308 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113120
CTGACTTTTGCTTCAACACGGTATTAATCTGAAGGAATGCACTGTGTTTGGGCCATTCACATGTCGTGTCTAAAAACGTGTGGAAAGCGCGGCCGCGCCACTTTCTCCTCCTTTCCAAAGCGTTTTCGCTCCTGTGGCGTCTGTCGTTGCTATGCAACCATTAACTGCGCTCTGCAAGATCACGAGGAAGTATCAGCAAAGGATTAATTGATATCTAGCCCTTGTATTAGGTTTACTAGATATATTTATGGAGATGAGAAATAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113120 True 267 lncRNA 0.44 1 10232042 10232308

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 179675 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 231321 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 276714 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 329160 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 345809 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 101569 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 102950 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 188267 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 276156 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 354891 10587199 ~ 10588775 (+)
G99406 NA non-coding upstream 672 10231114 ~ 10231370 (+)
G99403 NA non-coding upstream 4075 10227760 ~ 10227967 (+)
G99402 NA non-coding upstream 4495 10227322 ~ 10227547 (+)
G99399 NA non-coding upstream 7891 10223884 ~ 10224151 (+)
G99398 NA non-coding upstream 8587 10223246 ~ 10223455 (+)
G99409 NA non-coding downstream 136 10232444 ~ 10232755 (+)
G99412 NA non-coding downstream 5262 10237570 ~ 10237785 (+)
G99416 NA non-coding downstream 8481 10240789 ~ 10241233 (+)
G99417 NA non-coding downstream 9423 10241731 ~ 10242025 (+)
G99418 NA non-coding downstream 10029 10242337 ~ 10242595 (+)
G99041 NA other upstream 306388 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 435102 9795950 ~ 9842576 (+)
G98288 NA other upstream 1229325 8996098 ~ 9002717 (+)
G97824 NA other upstream 2216267 8014363 ~ 8015775 (+)
CI01000016_07784248_07784757 TWIST1, TWIST1.L, TWIST1A, TWIST1B, TWST2, TWIST1.S other upstream 2446319 7783987 ~ 7784996 (+)
G99410 NA other downstream 2092 10234400 ~ 10236851 (+)
G99456 NA other downstream 62083 10294391 ~ 10298904 (+)
G99940 NA other downstream 1439337 11671645 ~ 11672873 (+)
G100178 NA other downstream 1928333 12160641 ~ 12162845 (+)

Expression


Co-expression Network