G99416


Basic Information

Item Value
gene id G99416
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10240789 ~ 10241233 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113128
AAACTCGTTGTTGTGCTCCTCAAACCATTCCTGAACCATTTTTGCTTTGTGGCAGGGCGCATTATCCTGCTGAAAGAGGCCACAGCCACCAGGCAATACTGTCTCCATGAAAGGGTGTACATGGTCTGCAACAATGCTTAGGTAGGTGGTATGTGTCAAAGTAACATCCACATGGATGGCAGGACCCAAAGTTTCCCAGCAGAACATTGCCCAAACATTACACTGCCTCCGCCGGCTTGCCTTCTTCCCATAGTGCATCCTGGTGCCATGTGTTCCCCAGGTAAGTGACACACACGCACCCAGCTATCCACGTGATGTAAAAGAAAACGTGATTCATCAGATCCGGCCACCTTCTTCCATTGCTCCGTGGTCCAGCTCTGATGCTCACATGCCCACTGCTGGCACTTTCGGCGGTGGACAGGGGTCAGCACGGGCACCCTGACTG

Function

NR:

description
PREDICTED: titin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113128 True 445 lncRNA 0.53 1 10240789 10241233

Neighbor

gene id symbol gene type direction distance location
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 188422 10042016 ~ 10052367 (+)
CI01000016_09970010_09999304 NA coding upstream 240068 9969915 ~ 10000721 (+)
CI01000016_09934128_09954587 NA coding upstream 285461 9934128 ~ 9955328 (+)
CI01000016_09897221_09902690 NA coding upstream 337907 9896846 ~ 9902882 (+)
CI01000016_09868120_09886212 NA coding upstream 354556 9868076 ~ 9886233 (+)
CI01000016_10333877_10334229 NA coding downstream 92644 10333877 ~ 10334346 (+)
CI01000016_10339126_10370881 TRAK1 coding downstream 94025 10335258 ~ 10372651 (+)
CI01000016_10421936_10422623 NA coding downstream 179342 10420575 ~ 10424516 (+)
CI01000016_10508464_10510408 NA coding downstream 267231 10508464 ~ 10510832 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 345966 10587199 ~ 10588775 (+)
G99412 NA non-coding upstream 3004 10237570 ~ 10237785 (+)
G99409 NA non-coding upstream 8034 10232444 ~ 10232755 (+)
G99408 NA non-coding upstream 8481 10232042 ~ 10232308 (+)
G99406 NA non-coding upstream 9419 10231114 ~ 10231370 (+)
G99403 NA non-coding upstream 12822 10227760 ~ 10227967 (+)
G99417 NA non-coding downstream 498 10241731 ~ 10242025 (+)
G99418 NA non-coding downstream 1104 10242337 ~ 10242595 (+)
G99424 NA non-coding downstream 18112 10259345 ~ 10259566 (+)
G99429 NA non-coding downstream 24267 10265500 ~ 10265702 (+)
G99433 NA non-coding downstream 27381 10268614 ~ 10268889 (+)
G99410 NA other upstream 3938 10234400 ~ 10236851 (+)
G99041 NA other upstream 315135 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 443849 9795950 ~ 9842576 (+)
G98288 NA other upstream 1238072 8996098 ~ 9002717 (+)
G97824 NA other upstream 2225014 8014363 ~ 8015775 (+)
G99456 NA other downstream 53158 10294391 ~ 10298904 (+)
G99940 NA other downstream 1430412 11671645 ~ 11672873 (+)
G100178 NA other downstream 1919408 12160641 ~ 12162845 (+)

Expression


Co-expression Network