G99365


Basic Information

Item Value
gene id G99365
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10570702 ~ 10572556 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113077
TCTTTTATTACACACGCCTCTATATCCCAGCCATGCCTAATGACGTCATTCACATGAGGCCGTGACTTAAAGTGAAACCACACATAATGCTACATCCCCCTTCTTCCAGAGGGAGACAATCTAGTGAGAAAATAGCAACGTTAAATACAATCAACAACAAGACATCTGATAACAAAGAATAAGTGCAATAAGGGGAATGTTTCCGTAGCAAAATTACATAATGCTTGAACAAGAATGATAATGAACTAGATTTGCATAACACATATCAATCAGGTCAAAACATAGTCTTTGTAATGTTGGTTAGGGCGGCTGACTCTTCCAGAACGAGTCACCAGTGAACACTTGTTGTCTGTGTCAGTGCCACTTTAGGGGACTGAGGCTGTTACATGGGCTATTTGGTTGCTCAAAACCATGTGCTGTTTGCATCCTGACAGTTTGCCCCAGCTTCAGAGCAGGGAGCTGATGTGCATTTCTGTCATAATAGTCTTTCCCCCTCATTCTTTGTTTTGTGAGTGTTTCTTTTACGTTAGTTTGGACAACAGGGTGAAGCATGGGCTTCGTCACTGGGAGGAAGGTCCTTGTTTGCCTGGAAAGCAGTCTTTGTGCAGGGGAAGGTAAGGCATCCCGGGGAAGATTCCGAAGATGAAGAAGGGCAGCATGGATGTCAGTATTGTCATGGTAGCATTTTTCCAGAAGGTGCATGGCAGATCTGACTGCCCGCTCAGCCAGCCCATTGGACTGAGGATAGCAAGGGCTGCTGCGAATGTGCTTAAAGTCCCATGTGTGCGCAAAATCTGAAAACTCGTTGCACACAAACCAAGCAGCATAGTCATGACTTCCAGCAGGTCATCAGTGAGTTGTGGCTCAGATGTGGAAAGGTGGGCCCAGGACAATGCATCAGCCACAAACAGCTTCTTACCACATTTGAAGATCACATCTAGGTGGTAGCGGTGCAGTTTCATCATCATACCCTGTAAGCGGGGTGAGTCTGTGTGGTGTGGCTTCTTTAATATGGTTATCAAGGGCTGATGATCAATTTCTACAGTGACTGGCCGTCCGTAGATAAAATCATGGAATTTTTTTGTCGCAAACACGAGTGCCAGCATTTCTTTTTCAATCTGAGCATAACGGGATTCAGTAGGCATGAGAGCCCTTGATGCGAATGCCACAGACCGTCCTCGCTGAAGGCATACTGCACCCAGGCCATGTTGGGAGGTCTTGTGAAAGCCTTGTGATCTTCCTCATCCGCATAGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113077 True 1257 lncRNA 0.46 2 10570702 10572556

Neighbor

gene id symbol gene type direction distance location
CI01000016_10508464_10510408 NA coding upstream 59870 10508464 ~ 10510832 (+)
CI01000016_10421936_10422623 NA coding upstream 146186 10420575 ~ 10424516 (+)
CI01000016_10339126_10370881 TRAK1 coding upstream 198051 10335258 ~ 10372651 (+)
CI01000016_10333877_10334229 NA coding upstream 236356 10333877 ~ 10334346 (+)
CI01000016_10042324_10051398 CTNNB1.L, CTNNB1 coding upstream 518335 10042016 ~ 10052367 (+)
CI01000016_10587199_10588775 CNOT10, CNOT10.L coding downstream 14643 10587199 ~ 10588775 (+)
CI01000016_10676271_10682495 NA coding downstream 103531 10676087 ~ 10682839 (+)
CI01000016_10748252_10749230 NA coding downstream 175696 10748252 ~ 10749343 (+)
CI01000016_10756608_10758149 NA coding downstream 181837 10754393 ~ 10758201 (+)
CI01000016_10760640_10783664 ANO10A, ANO10 coding downstream 188084 10760640 ~ 10783859 (+)
G99362 NA non-coding upstream 48136 10516474 ~ 10522566 (+)
G99484 NA non-coding upstream 95959 10473981 ~ 10474743 (+)
G99461 NA non-coding upstream 184051 10385838 ~ 10386651 (+)
G99455 NA non-coding upstream 271090 10299359 ~ 10299612 (+)
G99454 NA non-coding upstream 278193 10292300 ~ 10292509 (+)
G99379 NA non-coding downstream 21479 10594035 ~ 10594264 (+)
G99498 NA non-coding downstream 32412 10604968 ~ 10606304 (+)
G99364 NA non-coding downstream 56907 10629463 ~ 10632125 (+)
G99554 NA non-coding downstream 163640 10736196 ~ 10736496 (+)
G99552 NA non-coding downstream 164031 10736587 ~ 10736879 (+)
G99456 NA other upstream 271798 10294391 ~ 10298904 (+)
G99410 NA other upstream 333851 10234400 ~ 10236851 (+)
G99041 NA other upstream 645048 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 773762 9795950 ~ 9842576 (+)
G98288 NA other upstream 1567985 8996098 ~ 9002717 (+)
G99940 NA other downstream 1099089 11671645 ~ 11672873 (+)
G100178 NA other downstream 1588085 12160641 ~ 12162845 (+)

Expression


Co-expression Network