G100346



Basic Information


Item Value
gene id G100346
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10736953 ~ 10737372 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU114178
GACAGCAGTGATTGTGTTTTATAGCTTTTCAAAAAAAAAGCCTTTTTGTTGTTTTCTACCTCATAAAACTGTAAAAGTTTCTTTGTTAGGATCAGAAGGGAGGCAGACAGGTGGATCAACAGAAAGCATGTATATCCTCCAGTCATCCAGTTCACATGTAGCGCTTCACTTATTGTAAACTGTTATGAGAAGATTTTCATGTAAGATTGCCACAAATTCTTTTTAAGTGCCTCAATTTCCAAAAAATGTGCACATTTTGTCGTATCCTCAATCATTTAAAATCCATCTACACCTGTAGGCCGATGTTTTCACAAAATGTAATTGAAGATTTTACTGAGCCCCAGGTCACAGTCTATTAAAGGGTTAGTTCACCCCAAAAAATGAAAATAATGTCATTAATTACTCACCCTCATGTCATTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU114178 True 420 lncRNA 0.35 1 10736953 10737372

Neighbor


gene id symbol gene type direction distance location
CI01000016_10637748_10650217 TCAIM coding downstream 86736 10637639 ~ 10650217 (-)
CI01000016_10600154_10633808 TRIM71 coding downstream 103145 10599202 ~ 10633808 (-)
CI01000016_10571262_10572444 NA coding downstream 163085 10570705 ~ 10573868 (-)
CI01000016_10443526_10488009 NA coding downstream 248767 10442845 ~ 10488186 (-)
CI01000016_10386099_10386648 NA coding downstream 349471 10385825 ~ 10387482 (-)
CI01000016_10740961_10745890 ABHD5A, ABHD5 coding upstream 2574 10739946 ~ 10745890 (-)
CI01000016_10799559_10842613 SNRK, SNRKA coding upstream 61813 10799185 ~ 10843409 (-)
CI01000016_10897488_10911334 NA coding upstream 158814 10896186 ~ 10911334 (-)
CI01000016_10931329_10940939 ENTPD3 coding upstream 193440 10930812 ~ 10941053 (-)
CI01000016_10970952_10971167 NA coding upstream 233135 10970507 ~ 10971167 (-)
G100350 NA non-coding downstream 74 10736548 ~ 10736879 (-)
G100413 NA non-coding downstream 21275 10652743 ~ 10715678 (-)
G100352 NA non-coding downstream 55247 10665429 ~ 10681706 (-)
G100351 NA non-coding downstream 185529 10529416 ~ 10551424 (-)
G100379 NA non-coding downstream 258101 10476982 ~ 10478852 (-)
G100358 NA non-coding upstream 9477 10746849 ~ 10749597 (-)
G100347 NA non-coding upstream 16242 10753614 ~ 10763884 (-)
G100469 NA non-coding upstream 155505 10892877 ~ 10893117 (-)
G100470 NA non-coding upstream 156199 10893571 ~ 10893899 (-)
G100508 NA non-coding upstream 215571 10952943 ~ 10953475 (-)
G100190 NA other downstream 684564 10051168 ~ 10052389 (-)
G99178 NA other downstream 921998 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 1224525 9509622 ~ 9512428 (-)
G98691 NA other downstream 1479342 9256102 ~ 9257611 (-)
G98679 NA other downstream 1497024 9234996 ~ 9239929 (-)

Expression



Co-expression Network