G100358


Basic Information

Item Value
gene id G100358
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10746849 ~ 10749597 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU114198
TGTTGCAGTTCCTGCTTCCATCATGGCTGATGAGAATTTAGCAGTGAGGGTCTTGACATCTTCCTCTAAAACATACTTGAAGGCTCAGAAACTTCTGTGACTTCTGGATCCTTAAGTCGTTCCAAGTCAAGCTTGATTCTGGGATTTTGCTTCCTCCAGGTCTTCTTGAGACATACACGGAAGTTCACCATGACTAAGTCATGGTCGCTTCCAATGTCTGCCCCTGGAAAAGTGTGGGTACTGGCTTGTTTTATTCCGCTCTTGAAAAGTTGTGGGATCATGATGTAATCAATCTAAATGTGGTGGATTCCATTAGGTGCATGCCATTTCCATTTATGGGAGTTCTTGTGGTTTTCCAGTGTGTTTGTCAGTATAAGGTTGTTATAGGTGGCTCCAGGTGGCTCCAGATGAACTCCAGTAGCCTTTCTCCCCCGCTATTGGTCTTGGGGTTGCGTGCTGTTCCGCAGGTGCCTTTCCAGTCTGACTGTGCATCAGTGCCCACCTTGGCATTCCAGTCACCTTGAATGATTATAATGTCTTTCTTTGGAGCCTTGTCGATGGTACTTTGCACCTGGTTGCAGAACTCTTCTGTGTCTTCCTCACTGTAATACGAGGTGGGTGCATAGGCTTGGATGACAGTAATGTTGAAAGGTGTTGCACCGAGGCAGATGGTAATGAGCCTTCCTGAGATTGGTTGACAGCCTAGTACAGTATTCTTGCTGTCCTTATCTACCAGGAAACCAACACCGTTCATGTGTCTGTCAGACTCTCCACTGTTGAAAAACAGATGGCCTTCTTGGTGGAAGTCTTTCCATCTAGTTTCACAGAGGCCTAAGAGATGCCAGGATTACTGTTTCATCTCATGGGTTAGTTCTATACTAATATAGCTGCAAATGGCAATCATCGGGATCCAAAAACCAATGACCCATGTGGATGATTAGTGATCCAATTAAAATGAATCTTATGATGCTGTTTTTACAGAAAAGTCCAACTTGAATCTTCACTGAAAGTTAGGGTTTGATGAAACAGGTTACAACAACACACAGGTATCAGAAGGGCAACTGATTTTCTGAATCTATCGCGGTTCTCTCTCGAATTGATTCTGAGCTTAGTTTTTAACAGCAGATGGCACTACGTGCTTTAGAAACAACTGTGCTCTGCTCTCTTCCAATTCCTTACACACTCCACTTGAACCTTGTATAAAATAATGACCATGCATCAAGCTCCAATGGCCACGGAGCTTGGCCCATCACGGTCACCAGCATGTCCAGTTATAATGGTTGTAGTCCTGTGTTTCCAGTACCTTCCTGTATCATGGACGCCACATCAGTGTTTCTGGTAGTCATGAACGTTGCATCTGAAGCAATCAAGGTGATTCCTAGGTGTTTGAAACTGGCATCTCTGCAGTGATGCAATGAGGTCTAGGGGTCTCAAAGGGGGTCTCACTGTCTACTGCACACCCTGTTACGATGATGGCTATTTTGTGTGTTTGGGCCGCACACTGCTCTCCAGCCCATGAGTCCACTCCAGAACGTGCTGGAGTGAGTCCGCTCCAGAACCCACTCCAGCCCATAAGTCCACTCCAGAGCCAATTTCAGTTTATGAGTCTGCTCCAGAGCCTGCTCCAGACCATGAGTCTGCTCCAGAAACTGCCCTGATGCAATCACGAAGGTTGCATATTTAAAACTAGCTTCCGGAAAATGGCCTTATGCAAGTCGAGTTACGGTGAAAGAGTGACCTCTGATGTGATGTAGGATGTAGGAATAGCATAAGCTTAGGTGAGATTAGACACCTCTCGCAAACAAATAGGGCTGGGTAACAAACTCAAGCTCCTCTTCTCTTATATCAAAATCCTCCAACGTTTCTTTTTAAAAATTCTCGTTTTAGACTTCTAATTCATGACCGATGTTTTGTTTTGCTCTTTCCTTTGCACTTCTGTGTTCATCAATAAGTCATGCATCGGGTCAGAGGCGACTCTTCCGTCGGAATTTGCGTACAGCCGTTTGCTGGAAGCTAGTTTTATAGTTTATACAGTTTTAAAAATGGATATTTTTCTTACAAAAACCAATTGCTTCACTTCAGAAGCCCTTTATTAACCCCCTGGAGCCATGTGGATTACTTTTATGATGGATGGATGCACTTTTTTGGGCTTCAAAATACCAACACCCCATTCACTACCATTATAAAGCTTGGAAGAGCCAGGATAATTTTTAATATAACTCTGATTGTGTTCGTCTGAAAGAAGACAGTCATATACACCTGGCTTGAGGGTGAGTAAATCATAAGATAATTTTCATTTTTGGGTGAACTATCCCTTTAATCTTTCAGTTGAAATGGCTGATAGTTTAGAATTTGCAGTTAGCATCATAAATTCATTAGGTATCCAATTCACCTTTTTTGTGCTTGGACTCCTAATAATAAAATATCAATATCCAGGGCATCATGACACTGTCTGTCAAACACATCAACACATTCTAAATGTCTCTGAGCTCATTAGAGTAGGTCTGTCATTACTACATATAGAAGAGTTTATTATTATTATGTGGGCTACTTGGATGATATATAAATCAGACTGTGTTTGTCTATAATTGGGAATTAGATTAAGCTCTAATGCAGAAATCCAGTTGTTTTTAAAGGCTTCACAAACTTATTCTTGCCACTGTATATTGATTTAGCCTTTAATTCAGTTTTATTGCTATCATCAATAATGTCATGTACAGTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114198 True 2724 lncRNA 0.42 2 10746849 10749597

Neighbor

gene id symbol gene type direction distance location
CI01000016_10740961_10745890 ABHD5A, ABHD5 coding downstream 959 10739946 ~ 10745890 (-)
CI01000016_10637748_10650217 TCAIM coding downstream 96632 10637639 ~ 10650217 (-)
CI01000016_10600154_10633808 TRIM71 coding downstream 113041 10599202 ~ 10633808 (-)
CI01000016_10571262_10572444 NA coding downstream 172981 10570705 ~ 10573868 (-)
CI01000016_10443526_10488009 NA coding downstream 258663 10442845 ~ 10488186 (-)
CI01000016_10799559_10842613 SNRK, SNRKA coding upstream 49588 10799185 ~ 10843409 (-)
CI01000016_10897488_10911334 NA coding upstream 146589 10896186 ~ 10911334 (-)
CI01000016_10931329_10940939 ENTPD3 coding upstream 181215 10930812 ~ 10941053 (-)
CI01000016_10970952_10971167 NA coding upstream 220910 10970507 ~ 10971167 (-)
CI01000016_10989691_11026452 NA coding upstream 238780 10988377 ~ 11026452 (-)
G100346 NA non-coding downstream 9477 10736953 ~ 10737372 (-)
G100350 NA non-coding downstream 9970 10736548 ~ 10736879 (-)
G100413 NA non-coding downstream 31171 10652743 ~ 10715678 (-)
G100352 NA non-coding downstream 65143 10665429 ~ 10681706 (-)
G100351 NA non-coding downstream 195425 10529416 ~ 10551424 (-)
G100347 NA non-coding upstream 4017 10753614 ~ 10763884 (-)
G100469 NA non-coding upstream 143280 10892877 ~ 10893117 (-)
G100470 NA non-coding upstream 143974 10893571 ~ 10893899 (-)
G100508 NA non-coding upstream 203346 10952943 ~ 10953475 (-)
G100510 NA non-coding upstream 207158 10956755 ~ 10957027 (-)
G100190 NA other downstream 694460 10051168 ~ 10052389 (-)
G99178 NA other downstream 931894 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 1234421 9509622 ~ 9512428 (-)
G98691 NA other downstream 1489238 9256102 ~ 9257611 (-)
G98679 NA other downstream 1506920 9234996 ~ 9239929 (-)

Expression


Co-expression Network