G100508



Basic Information


Item Value
gene id G100508
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10952943 ~ 10953475 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU114359
AGGGGCTGCGTTTACAGATTTACTAAACTTGTTTGGGGTCAAACAAAACGTCACTGGACCCACTCACCATCTTAATCATACACTAGATTTAATTATATCACATGGAATCAATCCTACCGATATAGAAATTCTACCGCAAAGTGATGATATCACTGATCACTACCTTGTAACATGCGTACTGCATACTGCTGATATTTGTCAAATTGCGCCACGATATCGACTAGGTAGAACAATTCTCCCGACAACTATAGATAAATTCACAAATAAACTGCCTGATCTGTCTCAGCTGCTCATTGTACCCAAACACACAAATGATCTCGAGAAAATGACTAGCAGTATGTGCACCACTTTCACTAGTACATTAGATACTGTTGCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU114359 True 376 lncRNA 0.39 2 10952943 10953475

Neighbor


gene id symbol gene type direction distance location
CI01000016_10931329_10940939 ENTPD3 coding downstream 11890 10930812 ~ 10941053 (-)
CI01000016_10897488_10911334 NA coding downstream 41609 10896186 ~ 10911334 (-)
CI01000016_10799559_10842613 SNRK, SNRKA coding downstream 109534 10799185 ~ 10843409 (-)
CI01000016_10740961_10745890 ABHD5A, ABHD5 coding downstream 207053 10739946 ~ 10745890 (-)
CI01000016_10637748_10650217 TCAIM coding downstream 302726 10637639 ~ 10650217 (-)
CI01000016_10970952_10971167 NA coding upstream 17032 10970507 ~ 10971167 (-)
CI01000016_10989691_11026452 NA coding upstream 34902 10988377 ~ 11026452 (-)
CI01000016_11034620_11091604 GRB10B, GRB10 coding upstream 81145 11034620 ~ 11091604 (-)
CI01000016_11161373_11165449 NA coding upstream 205893 11159368 ~ 11165449 (-)
CI01000016_11167265_11226409 COBL coding upstream 213790 11167265 ~ 11226409 (-)
G100470 NA non-coding downstream 59044 10893571 ~ 10893899 (-)
G100469 NA non-coding downstream 59826 10892877 ~ 10893117 (-)
G100347 NA non-coding downstream 189059 10753614 ~ 10763884 (-)
G100358 NA non-coding downstream 203346 10746849 ~ 10749597 (-)
G100346 NA non-coding downstream 215571 10736953 ~ 10737372 (-)
G100510 NA non-coding upstream 3280 10956755 ~ 10957027 (-)
G100512 NA non-coding upstream 21171 10974646 ~ 10974875 (-)
G100514 NA non-coding upstream 22679 10976154 ~ 10976460 (-)
G100516 NA non-coding upstream 27743 10981218 ~ 10981581 (-)
G100529 NA non-coding upstream 61219 11014694 ~ 11015416 (-)
G100190 NA other downstream 900554 10051168 ~ 10052389 (-)
G99178 NA other downstream 1137988 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 1440515 9509622 ~ 9512428 (-)
G98691 NA other downstream 1695332 9256102 ~ 9257611 (-)
G98679 NA other downstream 1713014 9234996 ~ 9239929 (-)

Expression



Co-expression Network