G99862


Basic Information

Item Value
gene id G99862
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11373878 ~ 11379117 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113643
ATTTTGGGATATCACTTACAAAACACTGGACGGAAATGCCAAGAAGCGTATAAATTGTAAAATGCACATAAAAAACGTATTCGCTCAATTGAGCTCATTTTTTATCCGATAAGAAAATATGCGTATAAACTATGATGGAAAAACATTTACCGAATGAATTCCACAATGTGCATCAAAACAGACTTGTGACTTTGCGATGGGACTGCATAACTGGATCAACCAGTGGACCGATCTCGTTGCACAGCATCTGCCTCCAAAACCAACTGCATTTATTGCATTTTGTCTGTGCGCTCTAAGGCACAAGTAATTATTATATACAGTGACTTCACTTACTTTTCTCAGTGATATTTAGCACCAGTTTATCAGGAGGCGAAGATTTTGTTCTCTTAGACTCACTGGATGGAAATGGTTCTTTATTCACAAATGTTTTATGCGATATTCCAATTTTGCGCATACTCTAAGTTAAATTTGCAACTTTGGATGGAAACATAGCTAATGTTCCTCAATGCATTGAACTCAACGCAACCCTCAATGCAACCCAATCTAAAGCGTTATATAATGTGATGCTCAAAGTTCAGACTTTAGCTTTGACCCAGTTTGCTGCTGACCTTTTAAAGCAAACACAATAAACACGAGACAATTTGCATGATTTATCATAATGTATAATCAATATTCTACATGATCCTGTACCCTTCTTAAACTAGTTATTAAACTCATTTAAATTCAACAAGAACATCCCAAGACAGTAAGGAGTCATAAAATGAGTCACTCATGTCTGAACAGTTATTTTTACTTTCTATGATGTATGAAGTTGGTACGACTCTTTTCTGTCCTTAACTTGTTTCCCTTATTCATCTTCTTTTGCTCTTTTTGCTGTTTATTTATGTACCATTCCCGCCTTTTTGAAAAACCTCTATGCTACTATCTGCAAAACTATTCATGCAGAGGTCAAGTGTCAACACTTGTGTTGAGAGATGAAGCCCTGATGTGATTCATATTCCAAGTCAGTCACTTACAAGGTTCCACATACAAGATTCGATTTTGGTGCATTCTTAAGGCCCATTTACACCAAGAACAATAACTATAAAGAGGAAATATTTGAGGAAAATAAGAGAGGGACACACTGTCGTCTCTTGAGGAAGCCAGTCTTGCGTTCATCCATCTCATCAATGGGAGAGGAGGAAGACAGGAAGGAGTTATCCGATGGGATGCAGGAAGGACTACTGCTATCTCTTTGCTCAACAGGGAGAGAACTGGGCCTGTCTTCGAGACTCATTTTGCTCTTGACGAGTTCCTCAATGGCGCTGACCAGTTCAGCTGCACTCGGTGTCTCTGAACTGCTGGGACGTCCAGACAGACGGGAGGTAGCCTTGTCCTCCTGGGAGTCCTGATGCAGAAGGCTGTGCTGTTGGATGGCCATAGGGGGCGGCAGGGGAACAGAGTCTGGGCCTTCCTCTCCCTCCATGGTCTCATCTTGTGGTGTGGCAGCACTGTCATCTGAGTCTTTCTGTGAGCCGGTGTCTGCGTTCTTGCGAACATCTCGACTCTTCTTGTGCTTGTGTGCGAGTTTCTTTACGTGGCCATCTGCTTTGCCACTGCTGAGCCGTCTGACGGGACTGGTCAGCCACTTGCGCAGAGTGTTTCCGGGCCGTTTGGGTCCAGGAGAGCTCTGCAAATGACCCGGCTGCAGCGTGGCACTGCCCGAAAGTCCTCCTTCATTACTGGAGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113643 True 1730 lncRNA 0.43 4 11373878 11379117

Neighbor

gene id symbol gene type direction distance location
CI01000016_11344848_11345696 NA coding upstream 28009 11344452 ~ 11345869 (+)
CI01000016_11330944_11334103 NA coding upstream 39412 11330213 ~ 11334466 (+)
CI01000016_11311430_11313782 NA coding upstream 59798 11310881 ~ 11314080 (+)
CI01000016_11298638_11300240 NA coding upstream 73372 11297670 ~ 11300506 (+)
CI01000016_11277549_11278592 NA coding upstream 95023 11276555 ~ 11278855 (+)
CI01000016_11499086_11499455 NA coding downstream 119761 11498878 ~ 11499609 (+)
CI01000016_11554406_11667350 DNAH5 coding downstream 175289 11554406 ~ 11667727 (+)
CI01000016_11949149_11958553 CA14 coding downstream 570032 11949149 ~ 11958718 (+)
CI01000016_12006986_12008107 NA coding downstream 627243 12006360 ~ 12009146 (+)
CI01000016_12012874_12083297 TAF2 coding downstream 633757 12012874 ~ 12083297 (+)
G99864 NA non-coding upstream 13644 11357022 ~ 11360234 (+)
G99873 NA non-coding upstream 24611 11349055 ~ 11349267 (+)
G99865 NA non-coding upstream 28875 11327295 ~ 11327387 (+)
G99854 NA non-coding upstream 51275 11321759 ~ 11322603 (+)
G99853 NA non-coding upstream 52223 11320764 ~ 11321655 (+)
G99884 NA non-coding downstream 15708 11394825 ~ 11395599 (+)
G100010 NA non-coding downstream 239671 11618788 ~ 11618990 (+)
G100046 NA non-coding downstream 310978 11690095 ~ 11696461 (+)
G99971 NA non-coding downstream 518869 11897986 ~ 11900048 (+)
G100149 NA non-coding downstream 611052 11990169 ~ 11991067 (+)
G99456 NA other upstream 1074974 10294391 ~ 10298904 (+)
G99410 NA other upstream 1137027 10234400 ~ 10236851 (+)
G99041 NA other upstream 1448224 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 1576938 9795950 ~ 9842576 (+)
G98288 NA other upstream 2371161 8996098 ~ 9002717 (+)
G99940 NA other downstream 292528 11671645 ~ 11672873 (+)
G100178 NA other downstream 781524 12160641 ~ 12162845 (+)

Expression


Co-expression Network