G100679



Basic Information


Item Value
gene id G100679
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11947221 ~ 11947828 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU114547
AGATGTCCGTATCTTTCTTTCTTCAGTCGAAAAAAAATTACGGTTTTTGATGAAAACATTCCAGGATTTTTCTCCATATAATGGACTTCAATGGACACCAAACGGTTCAAGGTCCAAATGACAGTTTCAGTGCAGCTTCAAAGGGCTTTAAACGATACCAGACGATGAATAAGGGTCTTATCTGGCGAAACGATCGGTCATTTTCGAAAAAAATACAACTGTATATGCTTTATATAAACAAATGTTCGCCTTCTAAGTGCTTCCGCCAAAACCGCATTTCCGTATTCTTCAAAAAGTTTACGCTGTATGTCCTACGCCTTCCCTATTCTACTTACGGAACGAACGCAGAGCCAGTTACATTTTTTCCGTAAGTTGAATTTTTTTTAAAAAGTGGACCTTTTTGCAGTTTTTCTCCTCCTTTTGTATTTAATTATGAGGTTCAAATACTTCATTTTGGTGACCTTTTATGCACTAATTTGTGCTGGATTAGCTTGTCTGCTGGTATCTTAACGAGCACGCTTTTTGATGCACCTAAAATATTTACTGCATTGTTGTCAAATTGCTTCCATATAGGCTATTATATTGTAGACTATTGAGTGGATAAAATA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU114547 True 608 lncRNA 0.36 1 11947221 11947828

Neighbor


gene id symbol gene type direction distance location
CI01000016_11938043_11946368 NA coding downstream 660 11937447 ~ 11946561 (-)
CI01000016_11908468_11923802 PRPF3 coding downstream 21456 11907727 ~ 11925765 (-)
CI01000016_11876020_11896223 ICE1 coding downstream 50998 11875492 ~ 11896223 (-)
CI01000016_11866962_11874982 PAPD7 coding downstream 72239 11865984 ~ 11874982 (-)
CI01000016_11670870_11794943 ADCY2A coding downstream 152138 11670818 ~ 11795083 (-)
CI01000016_12116368_12123187 NA coding upstream 168474 12116302 ~ 12123298 (-)
CI01000016_12137876_12146233 NA coding upstream 189946 12137774 ~ 12147884 (-)
G100670 NA non-coding downstream 45876 11901106 ~ 11901345 (-)
G100669 NA non-coding downstream 46360 11900642 ~ 11900861 (-)
G100490 NA non-coding downstream 133119 11748189 ~ 11814102 (-)
G100488 NA non-coding downstream 161665 11762108 ~ 11785556 (-)
G100625 NA non-coding downstream 317063 11629855 ~ 11630158 (-)
G100701 NA non-coding upstream 34248 11982076 ~ 11982307 (-)
G100712 NA non-coding upstream 51872 11999700 ~ 12000027 (-)
G100722 NA non-coding upstream 212927 12160755 ~ 12161232 (-)
G100190 NA other downstream 1894832 10051168 ~ 10052389 (-)
G99178 NA other downstream 2132266 9814361 ~ 9814955 (-)
CI01000016_09510177_09512196 ID4 other downstream 2434793 9509622 ~ 9512428 (-)
G98691 NA other downstream 2689610 9256102 ~ 9257611 (-)
G98679 NA other downstream 2707292 9234996 ~ 9239929 (-)

Expression



Co-expression Network