G100149


Basic Information

Item Value
gene id G100149
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 11990169 ~ 11991067 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU113957
TTCTCAAGTAAAATCTTGTAAAATCTTCCGGTTAAAGCTCTGTTACTTCCAGTTTTATTTGAATACAGATATAAATAATTTTGAGATTGTTACAGATACAGGTTCTACTGCATGCCCCTAATATGAATGCTGTTAATTCATGATACCTAAAATAATTACCAAAGGTAATTAATAGAACCTTATTGTGAAGTGTTATTATTGTTCTTTTTCTGAGCTACAAAAGATTTACAGCAGACATGAAGATTATAGTTCCAAATGAGGTTGATTAGGTTGAGTCAGTTGTGTGATGTGATAAACTTCTGATCAGTTATCCATTGCTTATTTTTTCTGTATTTTTTTTATTTTAACAATTGGAAAGATGCAGCAGTGTTACTGAAAACACAGAAAGCCGGGGTCTGAGTTCTTATAAAGTTGTGGTGTGAACAAGAAAGGGTCTGTGATCACTTCAATGCTGAAGAGGACCAAAAATAGAACTGGGTTCTCTTTTGAGTCCACTAGATTGTGAACACCAAAAGGACTGAGGTCACTTTCGGCTGATTCCCTTTCTGGTTCACTTTAAGTGAACTGGGTTTGGTTCTTTTAAACCGAACTACATGTGAAAAAAAACCTTAATGTGTTACACCAACTTGATAGAATACCAGACCCTCAAAGTAGTTATCCCTGATTGTCTTTTATTATGCCATCTTGAATGTGGAAACTTAAGCATGCCTGCCCGGTGTCAGTCCTTAGAGGAATTTCGCTGTGTTTGTGGAGTGGGTGCTGGTGAATAATGGCTCTCCGTTCACCATCATCCCACTGCACGGACATGACGCCAGAGCCCACCGCAGACAGAGAGCTTGAGTGTGCTGCGATGCATGAGCCAGCACCTATAAAGAGGACTGAGCCAAACATTGCCCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113957 True 899 lncRNA 0.39 1 11990169 11991067

Neighbor

gene id symbol gene type direction distance location
CI01000016_11949149_11958553 CA14 coding upstream 31451 11949149 ~ 11958718 (+)
CI01000016_11554406_11667350 DNAH5 coding upstream 322442 11554406 ~ 11667727 (+)
CI01000016_11499086_11499455 NA coding upstream 490560 11498878 ~ 11499609 (+)
CI01000016_11344848_11345696 NA coding upstream 644300 11344452 ~ 11345869 (+)
CI01000016_11330944_11334103 NA coding upstream 655703 11330213 ~ 11334466 (+)
CI01000016_12006986_12008107 NA coding downstream 15293 12006360 ~ 12009146 (+)
CI01000016_12012874_12083297 TAF2 coding downstream 21807 12012874 ~ 12083297 (+)
CI01000016_12087864_12111652 ENPP2 coding downstream 96797 12087864 ~ 12111772 (+)
CI01000016_12124439_12128957 NA coding downstream 132518 12123585 ~ 12129766 (+)
G99971 NA non-coding upstream 90121 11897986 ~ 11900048 (+)
G100046 NA non-coding upstream 293708 11690095 ~ 11696461 (+)
G100010 NA non-coding upstream 371179 11618788 ~ 11618990 (+)
G99884 NA non-coding upstream 594570 11394825 ~ 11395599 (+)
G99862 NA non-coding upstream 611052 11373878 ~ 11379117 (+)
G100162 NA non-coding downstream 151918 12142985 ~ 12143342 (+)
G100164 NA non-coding downstream 157451 12148518 ~ 12148815 (+)
G100173 NA non-coding downstream 165953 12157020 ~ 12157594 (+)
G100176 NA non-coding downstream 167815 12158882 ~ 12159090 (+)
G100178 NA non-coding downstream 169574 12160641 ~ 12162845 (+)
G99940 NA other upstream 317296 11671645 ~ 11672873 (+)
G99456 NA other upstream 1691265 10294391 ~ 10298904 (+)
G99410 NA other upstream 1753318 10234400 ~ 10236851 (+)
G99041 NA other upstream 2064515 9924418 ~ 9925654 (+)
CI01000016_09796196_09842235 NA other upstream 2193229 9795950 ~ 9842576 (+)

Expression


Co-expression Network