CI01000017_00542622_00545974


Basic Information

Item Value
gene id CI01000017_00542622_00545974
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 542622 ~ 546304 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000017_00542622_00545974.mRNA
ATTATCAGAGTGTTTATGACTGAGTTGGTGGTAAATGTGACCGCAGCCCAAAGAAACGGTCATCCCGCTGTGGACGATCACCAGAGACACGGAATGAGGGTCAAGCAAGGTAGGACTCTGAAGATTCTTGGTTTAAGTGTCCATAAGATCCCGTCCAGCTCAGATGTGAGGATCCTGTGGACCGGATCTCATTCCGTAGAGCAGAAGAAACAGAAGCAGTCAAAAAAATCTTCGGAGAAACTTACTGTGCAGAAAATGCCTTTTCCAAACATCAATGCCAACATTTTTCTTCAGAGCGCTGCTCCTGTGAGCTTTTTGATCATGGGTTTTGAAGTGATTTTCAAGATGAAATTTTCATGCCTATGCATTATTGTGATGAACCAATTTCTAGCACTCCTCATCTTAACTGTGCCTGCTGTCTTTGCTTCGGTTATGATCTCACTATTTTTAAGTTTTATAATATCTGAAAGCAGTGGAAGTTCTGAAGCACAAGGCAACAATGAACAATTTAATCGTATGATTAGTTTAATTCCACCTGCATTGTGGATCTGTATATTTTTCATCGATGGTGATTATTGTGCGTGTGGATTCACATATTGGGATGGACAGTATGTCTGTGATACAAGTCTTCATCCCAGTTGTTTCAGCTGGTGTAAACCGGAAGGAACAAATGGGACAGGAAAATATAACTACACACTATGGGTGAATAATATAACAAAGGTTTACCCAGAGCCAAAATCATGGATCTAAAGACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATACAGGTTTAATTTTAATTAATTAACAGGTCACTGAAATATTGAGAAATAGCAGTGAAAAAGGACTCTGAATTGATTTTTCAGTGTGGATGCAGAAAAACACAGAAGAGCCGGAGAGAGAGAAAAAATAATGTTCAGATGAGGGAGAGGAATATATGAGGAGCAGTTAGATCAGGATAAGAGAGAGGAGTAAGAATATGTGCTGGACATCGTTTTTAGAGACAGTGTTTCGAGAAGACACTGAGAGAGACGGACA

Function

NR:

description
hypothetical protein cypCar_00045302, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000017_00542622_00545974.mRNA True 1080 mRNA 0.38 4 542622 546304

Neighbor

gene id symbol gene type direction distance location
CI01000017_00505305_00517048 UBE2Q1, UBE2Q2, UBE2Q2L coding upstream 25574 503745 ~ 517048 (+)
CI01000017_00384546_00386526 NA coding upstream 155791 384402 ~ 386831 (+)
CI01000017_00358322_00362255 NA coding upstream 179904 358006 ~ 362718 (+)
CI01000017_00303881_00314010 CTTN coding upstream 228135 303881 ~ 314487 (+)
CI01000017_00290432_00292826 RELN coding upstream 247988 290432 ~ 294634 (+)
CI01000017_00558732_00563124 NA coding downstream 12428 558732 ~ 563322 (+)
CI01000017_00565569_00581478 NA coding downstream 18577 564881 ~ 581631 (+)
CI01000017_00643676_00677273 NA coding downstream 97372 643676 ~ 677299 (+)
CI01000017_00687984_00689034 NA coding downstream 141680 687984 ~ 689647 (+)
CI01000017_00722020_00762518 NA coding downstream 175716 722020 ~ 763373 (+)
G100868 NA non-coding upstream 61584 423599 ~ 481038 (+)
G100807 NA non-coding upstream 64191 417908 ~ 478431 (+)
G100872 NA non-coding upstream 91598 448507 ~ 451024 (+)
G100864 NA non-coding upstream 130509 411888 ~ 412113 (+)
G100861 NA non-coding upstream 136078 406194 ~ 406544 (+)
G100805 NA non-coding downstream 58066 604370 ~ 617022 (+)
G100806 NA non-coding downstream 144270 690574 ~ 694968 (+)
G100953 NA non-coding downstream 341851 888155 ~ 888997 (+)
CI01000017_00969981_00977045 NA non-coding downstream 423178 969930 ~ 977228 (+)
G101035 NA non-coding downstream 475725 1022029 ~ 1076674 (+)
G100957 NA other downstream 380779 927083 ~ 969319 (+)

Expression


Co-expression Network