CI01000017_01605157_01612590


Basic Information

Item Value
gene id CI01000017_01605157_01612590
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 1605157 ~ 1613008 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000017_01605157_01612590.mRNA
TTTATGAGTAGATTCCACGATGCCTTTGTCCAAAATAACGTTAACATGGCTATTATGATACTAATTGAAGAAAAATCTTCCGTATCCTTGACCGATCGACTGGACGAAGTTGTTATCAAGGCAGGTTTTGAATTTGCTTTTTCTGAATTTCCAAATCTGTTTTGCTATTTTGCTATCAGAACCATAAACTCTATGTTGGACAGCAGTCCCAAAGACATAAGGAAGAAACTCTGCCAGTCAGATGACCATACCGGGCTCTTAGAAGACTTGGCAAAAGCGTTGACAGACATTGGTGATTATGAAATGCAGGTGGCGATCTCTGAAGCACTCTGCAGGATGACACCGAAGAAATTAAGAGAAGACTTTGCTGGCAAATGGTTTAGTTTCAGAAGCTTTGCTTCAGCATTTACTTCAATTCGTGACAAAGATTTTGAAACTGACTGTAGGACATTTCTGAATGAACTTAATAGTTATTTTGGGAACTCAAGAAGAGTCTTCTCGTTCCCTTGTATTCAGGCATTTCTTGATTCAGTTGAGAACACACTGTGGGAGCTGATTCACCTGCCTAAAGATGTTGTCAGCATGTATGATCTTCAAGAGCGTGATGATCAGAAGATATTGTCTGTTCACATGAGTACCCCAATCTTTCATGGAGAGATCACTGGCAAAATGGTCAAAATCATTTTTAGTTCAGAGCACAACATCCAAACAGCCCTGACGAAAGTCTTTGCAGAGAAACCACAGTCTGCCTCAGCCTCAAAGGTGATCCTTGAGGTGTCTCAATGTCTGAGTGACACTTTTGACACAGAACGATCAGGGAAGTCACATGACAAGAAGCCAAAGACTATAACATTCATGGCTGCTTTATGGAGGTACCAGGTTGAGCGTGCCAAGACTGTATTGTTCTGTCAGACACCATCTTCCAACGGGTCTACAAAGTCCCTCCCTGACACTCTGGGTAGAATTCCTGTGAAGTATTCAACACCCAAACAAAGACTTCAAATGGCAAGTGAAGACTGGCAGTCTCAAGTCAAACTAGGGAGATCAGTGAACATAGAATCGTCCTTACTTAAAGAGACCACTGCTGATTCAGGTTTTCAAAACAAGAGTGTTTCTGAAACCAGTTTACAAGCAGAGGAACTTGATAATGTTATTGAAGAGGTACAACTTGATTTCAGTTGTTCTTTTAATGCATATTTATCTTAAGAGAAAAAAAAATAGCTAAATTACACTTTTTCTGTAATTAATTGCGATTAAAAACATTTATTTATTAATATTTTAGACTTTTATATTGTAATAATTTCACAGTTACACTCCAAATTAATGTAGAAACAATTTAAAGACAGTATATTTTAAATATTTGTTTAATGGCATCCTTTTATGAATGAAGGCTAGAATCACTGATACTAATACAGCTACTAATGTCTCTATTTTTATTTATTTATTTATTTATTTATTTATTTTTTTTTTTTTAAACATTACAGACATTCAGTTTAACTAAAAGCTATCAATTTCAACATTTATTAGGCTTTAAAAAAATTAACATCCTTTAACCTTCACATAAACCCATGCCATATTTACCTGTGGCCTTTCTACCTGTCTAATAGGTAGGAAATATACAGAA

Function

NR:

description
LOC100149910 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000017_01605157_01612590.mRNA True 1624 mRNA 0.36 13 1605157 1613008

Neighbor

gene id symbol gene type direction distance location
CI01000017_01534818_01538322 NA coding upstream 66564 1534276 ~ 1538593 (+)
CI01000017_01104045_01131388 NA coding upstream 473692 1104045 ~ 1131465 (+)
CI01000017_01067189_01070509 NA coding upstream 534563 1067052 ~ 1070594 (+)
CI01000017_01057310_01063843 NA coding upstream 540831 1056229 ~ 1064326 (+)
CI01000017_00969981_00977045 NA coding upstream 627929 969930 ~ 977228 (+)
CI01000017_01654491_01655975 NA coding downstream 41402 1654410 ~ 1656182 (+)
CI01000017_01737674_01834279 GNAL, GNAL.S, GNAL2 coding downstream 123557 1736565 ~ 1834374 (+)
CI01000017_01910759_01910947 NA coding downstream 297751 1910759 ~ 1911056 (+)
CI01000017_02052993_02060890 NA coding downstream 439985 2052993 ~ 2061564 (+)
CI01000017_02061927_02067003 NA coding downstream 448858 2061866 ~ 2067178 (+)
G101187 NA non-coding upstream 8543 1596395 ~ 1596614 (+)
G101181 NA non-coding upstream 19593 1585309 ~ 1585564 (+)
G101002 NA non-coding upstream 154261 1403460 ~ 1450896 (+)
G101004 NA non-coding upstream 177430 1419677 ~ 1427727 (+)
G101003 NA non-coding upstream 185965 1417169 ~ 1419192 (+)
G101007 NA non-coding downstream 11561 1624569 ~ 1625221 (+)
G101199 NA non-coding downstream 49552 1662560 ~ 1666903 (+)
G101830 NA non-coding downstream 90491 1703499 ~ 1703994 (+)
G101835 NA non-coding downstream 99329 1712337 ~ 1712628 (+)
G101839 NA non-coding downstream 102656 1715664 ~ 1715957 (+)
G100957 NA other upstream 635838 927083 ~ 969319 (+)

Expression


Co-expression Network