CI01000017_02061927_02067003


Basic Information

Item Value
gene id CI01000017_02061927_02067003
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 2061866 ~ 2067178 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000017_02061927_02067003.mRNA
CTATAAAAAAAAGCCAAATTCATTTCATTGGCTGTGGATGAATCCACAGACAACACAGACAATGCACAACTCATGGTCTTTGTCAGATTTTTTGATGAAGGGAGAATTTCATGTTTTGGATGTCACAAACCTCCATGGACACACAAGGGGGGACGATATTTATGAAGCAGTGACACAGATGCTTAGAGACAGAGAGATAGACCTGAAGCATGTTGTTTTCATTGCTACTGATGGAGCGCCAAGTATGATTGGGAGAGAGAGGGGATTAGTGGCACGCTTGAGAGCTCACCACCCTGACCTCATGGCATACCACTGCATAATTCACCAGATGGTTTTGTGTGCCAGCCTTGGAGAAAGGTACATGGAAGTCATGACAACAGTCATGAAACTTGTCAACTATCTGAGAGCATCCTCTGCTCTGCAACATCGTTTGTTGCGCTCATTTCTAATAGAGGTGAATGCAACATTTGATGATTTGCTCCTTCACAACCACGTCCGGTGGCTTAGTAAAGGCAAGGTACTGGAGTGGTTTTGGGCACTGCGGAAAGAGCTGGAGACTTTTCTGTTGGATCAGAAGAGTGCAAAAGCCAAACCGTTTGTGGATTTCATGAAGAATGAAGAGGAAATGGAAATTGTTGCTTTTCTAACTGACATTACTTCCCATCTCAATGACCTTAATATGAAGCTCCAGGGCAAAAACAGCACAGTGTGTGGCCTCATGTCAGCTGTCCGTGCTTTTCAGAGGAAGCTGGAGGTTTTCAAATGTGACTTACAGCAGGACCTGCTTCACTTCCCAAGACTTTTGGATCAGACTGCAGGAAAACATCACCATCACAATTATGCTGAATTCCTGGACAAGCTGATCAAAAATTTCCAAAGTCGCTTTGAAGATTTCCCTCTGGGAAAACAAGTCTTGCTGTGCATTGAAAATCCATTTCTTGTCAAAAATATTGCAGAATTCTCAACTGAAGCCACGAAAGTCTTCCAATGGGCCAGTGCTGCTTCTCTGCAAACAGAGCTAATTGAGGACGAAGATGGTCACTGCAGCAGTTTAAACAACTGGTGGCACAAAGAAGGTGTCACCTTTCACACTAAAAGGCCTACCATGTCGTTTTTTGTGTATGGTTCGAAAGTTCTGGGGATTGCCTCTGTTTTTTTTGTTGGAGTTCTCTATTTGGAATTTGACCATCACTTTTCTGGACCTCGGACTGAATGGAAATTTGGCCGTTCTGTCACAACATATACCGACTCACGTTATGCCTTTGGCGTCTGCCATGACCATGGGGCAGTATGGAAGAACCGAGGTTTCCTTACTGCTAACAGAAAACCTGTGGCACATTCAAAATTGATTGATAAGTTATTGGAGAATCAATTGTTGCCAAAAGAAATCGCTATTTGTAAATGTGCGGCTCATACAAAAGCTAGTGATGAAGTATCCAAAGGTAATAACTTTGCCGATTCCGTAGCAAAAAACACGGCACTGAAGGGACACGTGCCAACTGAATTTATAGGTTTTACATCCCTTGCTACCGATAGCACCCAGTTACCACCGTCATTAAGTGAGATTCAGAGACTGGGTACTGACTGTGAGTTGAAAATTTGGATTTTACAGCAGGGGCAGAGAAATTTTGCCAGAATTGCTACATTTGCCACATTTGCGCAGCGAATAATGTGGGAAAGCAGAGTACGTCATGATGGATTTCATCAAATTGACACCATGCCAAGGAATCTAATACGAGAGGTAGTTCCCAGATGGGGAGTGCCTGAAAAATTGTCTAGTGACAATGGAACTCATTTTGTAAATAAAGTTATAACTGAATTGGCAAGAGGGCTAAGAATAAATTTGAAAACACACTGTTCCTATAGGCCACAGAGTGGAGGCGCTGTTGAGAGGTCTAACCAAACAATAAAGAGTAAATTGTGTAAAGTCATGGCAGAAACTGGAATGGCAATGGCATGGGTCCAAGCCTTACCCATTGTTTTGATGGCCATGAGAGCCCAAAAAGGGGCAAGAACAGCCCTCAGCCCACATGAAATTCTTACAGGTCATCCCATGCACATAGGAATTGAACCTCCTCCCCAGGAGGGTTTGGTGGGGGTAGATGAACAAATGAGAAAATATATGTTGTCATTAACAAAAACTATCAAAACAATCCATTCACAGGTTAAAGCTGCTCTGCCAGTTCCAGGTATTGGACCACAGCACTCTTACGGGACAGTGGTCTGGATCAAAGATCTCAGACGGAAGGCGTGGTGGTTAGGGTCGTACAAGATCATCCTAACAACAAAGACCGCAATCAAGGTCGCCGAACGTGACACCTGGGTTCACGCGTCACATTGTAAGTCCCACCAACACACAGATTCAAGCCAAAAGGAGTGTTTCAAGATGAGGGAAAGAGAGATGATGCCAGTTCCTGTTCATCATGACCACTCATCTGACGTAGACCAGCACCATTTCGGGTTGAACATGTTTTGGAAATATGCTAATTACACAGCCAAACAGCATGCACCTACTAAAAATTGCTATGTTTGTGCACAGGCCTCCTTCTCTGCCACGTACCCATATCCAATGTCTCCAGAGCAAGTAGAGGGTCATGAATTAAGGTGTATTATGATTCGTATAGCTGGACCAGGGTCGGAGTGTTCCCGAAAGATCCTCCGAAGAGGAGAACCCCTTGAGTGTGAGAATGTGACCACTACTGCACCAACCCTCTTACTTAGCAGTGAAGGAAAGAAAATGATTTGGCCTAACCCCGGACAAAAATTCAAAGAATGTTACCGATCTCATAAGGGGGTTAATTTTATAGGGATTCTTGAGGGGTCTGAGCACAGAGTGATTGCCAAGACAGCTCAATTCTGGAAAGCTTTTTTGATTCACAATGCTGTAACAGACTCAATGAACTGGATTAACAGAATTCACTACGAACTATTCCGATTTGCAAATGACACCCAATCGGCTTTGACATTTTTGAAAACTGAAGTAGGAGCCCTGAAACAATTGACTCTAGAAAACAGAATGGCTCTGGAAGCAATTCTAGCAGAGGAGGGGGGAGTTTGTGTGAAAATTGGTGAAGATTGCTGTACTTTTATTCCAGCTTATGATGCTGATGATGGTAGCATTTCAAAGGTGCTGGCAGACATGACAAAGGTGCGGAATGATCTGTGGCAGAATGAACAGGCCATGAATAAGGGGATAGGATGGAGTTTAGATTGGATCTCTGATGTCTTCCGCAATGTTTTTGGCAATATCTTCGGACCCATACTCAAGTTTTTGGCAATGATAATCACTACCTTGCTCATTGCAGTGCTGATAATTGGATGCTTAATGAGGTGTATTCGAGCTGTTTTGGGGAGATTTGTCTGAAGCATTGTGGAAGCAGCAGCAGGAGGAGGAGAATATGTGGATCTGCAGCCAGTTAACAGGAATGTTGAATACCAAAATCTTCATAATATGCGTCCATTTTAATCAGGCTATTTGATCATTTTGATTGAAGTAAAATATGATCAAGAGAGGGGAATTTGATAGAATTTTTTAACTA

Function

NR:

description
putative general transcription factor II-I repeat domain containing protein 2-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000017_02061927_02067003.mRNA True 3539 mRNA 0.43 7 2061866 2067178

Neighbor

gene id symbol gene type direction distance location
CI01000017_02052993_02060890 NA coding upstream 302 2052993 ~ 2061564 (+)
CI01000017_01910759_01910947 NA coding upstream 150810 1910759 ~ 1911056 (+)
CI01000017_01737674_01834279 GNAL, GNAL.S, GNAL2 coding upstream 227492 1736565 ~ 1834374 (+)
CI01000017_01654491_01655975 NA coding upstream 405684 1654410 ~ 1656182 (+)
CI01000017_01605157_01612590 NA coding upstream 448858 1605157 ~ 1613008 (+)
G101891 NA non-coding upstream 78159 1983469 ~ 1983707 (+)
G101887 NA non-coding upstream 80368 1981230 ~ 1981498 (+)
G101883 NA non-coding upstream 83923 1977675 ~ 1977943 (+)
G101821 NA non-coding upstream 105213 1844454 ~ 1956653 (+)
G102039 NA non-coding downstream 11088 2078266 ~ 2084974 (+)
G102044 NA non-coding downstream 32324 2099502 ~ 2101068 (+)
G102046 NA non-coding downstream 36224 2103402 ~ 2103811 (+)
G102093 NA non-coding downstream 60311 2127489 ~ 2129122 (+)
G102094 NA non-coding downstream 61534 2128712 ~ 2130482 (+)
G100957 NA other upstream 1092547 927083 ~ 969319 (+)

Expression


Co-expression Network