G100861


Basic Information

Item Value
gene id G100861
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 406194 ~ 406544 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU114757
CAATAATCCAAAAAAAGTTGAAATTTTGATTCACGGCCTCTAAGGGGCGCCAAAACGTTTGAAGTGGGTGGAGCCACGTTGACTAAAATGACTATAACTCGTGAATGAAATGAGATATTTTCACCAAACTCAGCACACCTATGTAAGAGCTCATTCTGTGGTCGCGTGACAAAGGACTCGGCGACTGGCCACTTGGTGGTGCTATAACATGAAGAAAACATGAAAATGGCTATAACAACTTCACCATTAGTCCGATTGACTTGAAAATTTACATGCAGTGTCTTCATCCGAGATGTCATGATTGATTATGAGGACATTGACGTATCTCAAAAAACATGTCCGCCATCAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114757 True 351 lncRNA 0.42 1 406194 406544

Neighbor

gene id symbol gene type direction distance location
CI01000017_00384546_00386526 NA coding upstream 19363 384402 ~ 386831 (+)
CI01000017_00358322_00362255 NA coding upstream 43476 358006 ~ 362718 (+)
CI01000017_00303881_00314010 CTTN coding upstream 91707 303881 ~ 314487 (+)
CI01000017_00290432_00292826 RELN coding upstream 111560 290432 ~ 294634 (+)
CI01000017_00275839_00288868 RELN coding upstream 117088 275839 ~ 289106 (+)
CI01000017_00505305_00517048 UBE2Q1, UBE2Q2, UBE2Q2L coding downstream 97201 503745 ~ 517048 (+)
CI01000017_00542622_00545974 NA coding downstream 136078 542622 ~ 546304 (+)
CI01000017_00558732_00563124 NA coding downstream 152188 558732 ~ 563322 (+)
CI01000017_00565569_00581478 NA coding downstream 158337 564881 ~ 581631 (+)
CI01000017_00643676_00677273 NA coding downstream 237132 643676 ~ 677299 (+)
G100810 NA non-coding upstream 22730 380742 ~ 383464 (+)
G100839 NA non-coding upstream 199410 206431 ~ 206784 (+)
G100803 NA non-coding upstream 229533 130742 ~ 176661 (+)
G100825 NA non-coding upstream 374773 30540 ~ 31421 (+)
G100823 NA non-coding upstream 377198 28763 ~ 28996 (+)
G100864 NA non-coding downstream 5344 411888 ~ 412113 (+)
G100807 NA non-coding downstream 11364 417908 ~ 478431 (+)
G100868 NA non-coding downstream 17055 423599 ~ 481038 (+)
G100872 NA non-coding downstream 41963 448507 ~ 451024 (+)
G100805 NA non-coding downstream 197826 604370 ~ 617022 (+)
G100957 NA other downstream 520539 927083 ~ 969319 (+)

Expression


Co-expression Network