G100868


Basic Information

Item Value
gene id G100868
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 423599 ~ 481038 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU114764
GTGTTCAGCCTTACATTGTTCAAACCGGAGTCGACACTGATGGAGAGACTCAGGAAGAAGTTACAACATTTAGACGTTTCTGAATGGTTAGTGGATAAATTTATGTAGTTGCTGTGGAGTTGATTCAACTCATCCACTAGCATGTGCCGTCATGTTAATCTTTTTTCGTTGAATTGACCCTCGTTTGTGAAGCAGTAAAATGACAGCATGTCAACAACACTCTACTACAACAACTCTTCCTCTTCTCTAAAGCAGCCCAACATGGCCCCGCCCCCTTTGTTGTGTGTTCTCGGGGGCGGGGTTTATGTAAATTTTAGGATTAGTGATGTCACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114764 True 334 lncRNA 0.43 2 423599 481038

Neighbor

gene id symbol gene type direction distance location
CI01000017_00384546_00386526 NA coding upstream 36768 384402 ~ 386831 (+)
CI01000017_00358322_00362255 NA coding upstream 60881 358006 ~ 362718 (+)
CI01000017_00303881_00314010 CTTN coding upstream 109112 303881 ~ 314487 (+)
CI01000017_00290432_00292826 RELN coding upstream 128965 290432 ~ 294634 (+)
CI01000017_00275839_00288868 RELN coding upstream 134493 275839 ~ 289106 (+)
CI01000017_00505305_00517048 UBE2Q1, UBE2Q2, UBE2Q2L coding downstream 22707 503745 ~ 517048 (+)
CI01000017_00542622_00545974 NA coding downstream 61584 542622 ~ 546304 (+)
CI01000017_00558732_00563124 NA coding downstream 77694 558732 ~ 563322 (+)
CI01000017_00565569_00581478 NA coding downstream 83843 564881 ~ 581631 (+)
CI01000017_00643676_00677273 NA coding downstream 162638 643676 ~ 677299 (+)
G100864 NA non-coding upstream 11486 411888 ~ 412113 (+)
G100861 NA non-coding upstream 17055 406194 ~ 406544 (+)
G100810 NA non-coding upstream 40135 380742 ~ 383464 (+)
G100839 NA non-coding upstream 216815 206431 ~ 206784 (+)
G100803 NA non-coding upstream 246938 130742 ~ 176661 (+)
G100805 NA non-coding downstream 123332 604370 ~ 617022 (+)
G100806 NA non-coding downstream 209536 690574 ~ 694968 (+)
G100953 NA non-coding downstream 407117 888155 ~ 888997 (+)
CI01000017_00969981_00977045 NA non-coding downstream 488444 969930 ~ 977228 (+)
G101035 NA non-coding downstream 540991 1022029 ~ 1076674 (+)
G100957 NA other downstream 446045 927083 ~ 969319 (+)

Expression


Co-expression Network