G101005


Basic Information

Item Value
gene id G101005
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000017
NCBI id null
chromosome length 2146858
location 1394016 ~ 1395844 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU114915
TAAATAAAACCATCCAGCATGTTGGTCAAACATTTAACTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATATGCATTGTAAAATATTTTTGTGAAAAAAATTTGTCAGATAAGCTAAACATGTCCATCTATATTACTACTTTATTTAAGTAAAAAAAAAAATATATATATATATATATGTATACTCGTCAACATGACTGCATTCTGTTACAGCAAGACAAGCACTTTTAGGGGTTTTAGGTCAGGTAGAAATAGCTTCTAATGTAGCAGCTTTCACTTTTTACAGGTAAATTACAATCCGTTTAATTGAATTTCATAAAAGGTTTCAATTAATCATCCACCCACTTGTTTATCTTTGATACATTAGCATTATGTAAGCTCAGAGAAGGAGCTAATTCTATATTACACAGACACTCTGGATGGTTCATACCACTTTATATATTTCACTGGACAAAACTTTGCTGGCATCTTCCTTCGGCTTGGTTATGACTGAGAGCATTGGGTTCAAATATGCTTTATTCTCATCAAGACCAGTTTGTACCAATATGTCAGTCTTTTTGTAAGCATTACGATTGACGGCCTTTCTTCTGGCAGCTTGGTTAAATTTGGAGCTCTGAAAAAGGTCATTAATGAATGCACGCTTTCTGAACATTTTCATTGCTGTTGTTGATATGTTTCGAGAACACAAGCTTGTTCTCTCTCTCTTTCTTTCTGTCTGTAGTCAGTCAGTTCCCTCAATATGACATGGCCACTCTGTCAGCTCTCTGGGAATTAGAGAGTGGGAGTCTATTACTCTGAATCTGGCAACCCTGAGGCAAAGCAAGCCCTCTCTCCTGCCTCTGTTCTGCCCGGTCCTGCAGTCCTGTTCACGAACCCGTCTGTACTCCTGGCCTGCTTGAGTGTATGTGCTGCTGAAACTACAGGATCAGGATGGCTGTGGGTTTGTTCTTTGGATGTGGGTCAATGACAGTGTGTTGATAATGCACAATGATGCAACTTCGCTGTAAAAAAAACAACTCATTGGTATGAAAGCTTATTTCTGCTGTGGAATAAAGAATTAAACAAGGTAATTGCAATGTTTTATCTCACAATTCAGACTTTTTTTCTTGCAATTGTGAGAAAAAAATCCAAATTGTGAGATATAATCTCAAAATTGTGAAATGTCACAGTTGGCTTTATTATTTTTTTATTCTGTGGCCGAAACAAGCGTCCATACTTTGGCACCCACAAGCTGTATTTTATTATTATTATTATTATTTTTCTATACAACACTCTGATCTCTTTCACACCAGCGTTCATCTCTGTTTGGCTTTACAGTTCATTCTCAGCACTCCCAGAGTCAGTATCAATCTCTCTGGATTCTTTCATCTCTAACTTTTCCTGAAGTGTAAGGATGTTAATCATGGTGTTCAGACCACTCTTTCCATTATTGGATCCTTTGATCATAGTTCTCAGCTAATCTTGTGTCGTTTGGATGTTATTTCTCTCCCCTCCCATCAAATAGCAGATGTATATCAGCCGGATCGCTGCTGTTGATTCAGTCGGCAGTTATTTGCAATTGGCTTTATGTAAAAAGGTTTTCTGAACTTGTGTTGTTATTCTGGTAACACTTTACAATAACAATTTTCAACATTATTATTGGTTTAACTTAAAAAAAAGGAAGTTACCTGGTTGCCTTAAAATTTTGAGTTTAAAAATTGAGTTAGGACAAAGAAGGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU114915 True 1727 lncRNA 0.37 3 1394016 1395844

Neighbor

gene id symbol gene type direction distance location
CI01000017_01104045_01131388 NA coding upstream 262551 1104045 ~ 1131465 (+)
CI01000017_01067189_01070509 NA coding upstream 323422 1067052 ~ 1070594 (+)
CI01000017_01057310_01063843 NA coding upstream 329690 1056229 ~ 1064326 (+)
CI01000017_00969981_00977045 NA coding upstream 416788 969930 ~ 977228 (+)
CI01000017_00722020_00762518 NA coding upstream 630643 722020 ~ 763373 (+)
CI01000017_01534818_01538322 NA coding downstream 138432 1534276 ~ 1538593 (+)
CI01000017_01605157_01612590 NA coding downstream 209313 1605157 ~ 1613008 (+)
CI01000017_01654491_01655975 NA coding downstream 258566 1654410 ~ 1656182 (+)
CI01000017_01737674_01834279 GNAL, GNAL.S, GNAL2 coding downstream 340721 1736565 ~ 1834374 (+)
CI01000017_01910759_01910947 NA coding downstream 514915 1910759 ~ 1911056 (+)
G101143 NA non-coding upstream 36317 1312727 ~ 1357699 (+)
G101091 NA non-coding upstream 184167 1176156 ~ 1209849 (+)
G101059 NA non-coding upstream 199408 1191273 ~ 1194608 (+)
G101067 NA non-coding upstream 245789 1147926 ~ 1148227 (+)
G101039 NA non-coding upstream 303440 1088388 ~ 1090576 (+)
G101002 NA non-coding downstream 7616 1403460 ~ 1450896 (+)
G101003 NA non-coding downstream 21325 1417169 ~ 1419192 (+)
G101004 NA non-coding downstream 23833 1419677 ~ 1427727 (+)
G101181 NA non-coding downstream 189465 1585309 ~ 1585564 (+)
G101187 NA non-coding downstream 200551 1596395 ~ 1596614 (+)
G100957 NA other upstream 424697 927083 ~ 969319 (+)

Expression


Co-expression Network