CI01000018_00777676_00783256


Basic Information

Item Value
gene id CI01000018_00777676_00783256
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 776512 ~ 783529 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_00777676_00783256.mRNA
ACTTCAAGAACTGAATCGAAATCAAAGTTTTTTAATAAGGCAGTTCATTCATTCACAGCAGTATTTTAGCTGATATGTAAATCATTCTACAATGTAATGATGTTTGTCTGTTCTCTCTTTCATTCCACACAGGTAATCAGTTTTGGATAAAGGCATGAAGGGAATGAGTCAACAAGCTGTTCTCGTTGACAGGAACCAAATCTCAATCTACATATTCAGCATTATCAAGCACAATCTGCCATCAGCGTTCATCAAATGCCATAAATCACAATCATGGCATCTACCGGAAGCAAATTTACCATTTTTCGATGGCTATGCACCCTTTTGGGATTAATTTTTTATGTAGGAGACATTGGATCAGACCTGTTGTTATCTGTGCAGTATTTTAGAAACGGTCATGTGACCTGGGCTGCACTGACTCTAGTGTTTGTTCTAATCGCATCTGTATGCATACAGATGTTCAGTTATGCATGGTTCAAAGATGATAAAAAAAATGAAGAAAATGACAAGGATCTGTCCACTTGCCATCTGATCGGGATACATGCACTGCAGATAGGCATTTTAACAAGGTATTACCAACTCCTGAAGAAGAGTTTTAAAGCCCTGTGTTCAAGCAAGACTCAAGAGGAGGAGCCATTACGCATTTTCACCCTCGCTACAGATCTCAGCATGCTTCGCATGTTTGAGACGTTTTTGGAGAGTGTTCCGCAACTCATTCTGCAGGTCTACATCATACTGGAGCACAACCATCGATCTAATCTGCAATACATTAGCATGGCCGTGTCTTTCGTCAACATAGCCTGGGCCACGGTGGATTATCGACGTTGTTTACGGCGCTCTCTACCTTACGTTAATGAGATGCCATCTGGAATCCCAACAGCTGTCTACTTGTCCTACAAAGTATTTACCATAACCCCTCGAATCCTCAGCCTCACCCTCTTCATCATGCTTTCCACTTTTAGTACTCTAGCAATGGCCTTGATATGGCTGGTGGCAACCATCTGGGCATTTGTGGAGAATACCGAATTCTGCACTTCACGAGTCCTTGAACATCTTTATCGAGCCGTTGTTGGATTCATCCTCGTTTTTACCTTCTTTAACATCAAAGGAGAAAACACCAAAGTTCCCATGACTCTGTATTATATTTTCATTGTGTGTCACAATCTTGCTGCACCTATTTTATTGTTTCTGCTCAAACCAGAGTCTGAAGGGACTGACTACTTCCTGCCCATCATATTTTTTATATTATTGTCAAATTCACTCGGACTGGGTTTTCTGGGACTCTATTACAGCCTCCTGCACCCTCGTAGACCTGAGGAAGATGAGGTAGATGGAATGGAGAAACGGAAACCAGAGCCAAAAACACGTTTAGATCGTTTTTTACAAATATAATGATAAATATCTTGATCATAATCTAATGAACTTGACTAACAAAAAAGGTGCATATTTATAGATATTTATTATGATGGAATTGATAAAGTATGAAGGATCTATGTTAAAAAAGCTGCTAAGGAATAATATCTGATTTTACAGGTATGAAATGTTGAACTTTACAGGTTTCACTGAACTTGTAAAAATTATGAATAAGCTTTTTTACTGTCAATGTTTGCATTCAGTTTATTACATCCTTTCCCAATAGAGCTGTTCAGTGTGCAATCTGAAAGTGATAATTGCCTAGCACAAAGTTATACTTTGCACTCTGACTTTGACCAAGTTTGTGGTTACTAAAAAGTTTTAGAAAGAAAGACTAGTAATAGTAGTAATGTGCTAAAACATGCTAGCAACATTTAGCAATTGTTAAGACATGCTAGTAACATGCTAATTCATGTTAGCAACATGCTAAATGCTTGCAATGGGCCATGCTAGCAATATACTAAAACATGCAACAAACATGCAAAATAATGCTAAGCACATGCTAAGACATGCTAACAACATAAAACTTGTTGGCAACATGATAAAACATGCTAGGAAGCATATAAAACTTTCAGACAAGGCTTTGTCAGGCCAACATAAAAGTTTGTCCCAATTAACTTTTCTTTTATTATTATCAATGTTGAAAACAGTTGTGTTGTTTAATGTTTTTTGTGGAAACTTGGTAGCTCTGCATACATAATTCTTTGATAAACAGAAAGCTCAAAAGAACAGCATTTATTTGAAATAGAAATCTGTAACATTATAAATGCCTTTACTGTCACTTTTGTTCACTTTTACGCATCCATTCTGAATAAAAGTATTCATTTCTTTAAAATTCTTACTGAAAATCGTTAAAAATCTTACTGACCCCAAACTTTGCACGGTGGTATATATCTACACAAACCAGAATTTGTGCTCTGCCTCGGAACAGTTTTCTGTTAGTAGTTCAATCACTACCACTAAAAAAATACTGACACAAGATGGCACTGTTGTTCCAAAAAAGCCTCTTGGATAAATACTGCCTCATCCAAACGGAGATTTTGTTGCCATCATGGAGAATTGTTAAACCATGAGCTGAGACATGAACATGATCTTTGTCATAATATAATTGTTTTATTGTAAATAATAACTTTTTGTAATAAA

Function

NR:

description
Zgc:136412

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_00777676_00783256.mRNA True 2556 mRNA 0.37 3 776512 783529

Neighbor

gene id symbol gene type direction distance location
CI01000018_00333019_00452055 NA coding downstream 324457 333019 ~ 452055 (-)
CI01000018_00318175_00326190 NA coding downstream 449700 317689 ~ 326812 (-)
CI01000018_00259118_00271046 RDH10, RDH10A coding downstream 505058 257887 ~ 271454 (-)
CI01000018_00229092_00242308 NA coding downstream 534121 228822 ~ 242391 (-)
CI01000018_00207988_00210462 NA coding downstream 564183 207970 ~ 212329 (-)
CI01000018_00837737_00838788 NA coding upstream 54021 837550 ~ 838864 (-)
CI01000018_00985130_00987510 NA coding upstream 201463 984992 ~ 987689 (-)
CI01000018_00992108_01000450 ZFHX2 coding upstream 207917 991446 ~ 1000450 (-)
CI01000018_01030816_01076302 JPH1A coding upstream 246308 1029837 ~ 1076302 (-)
CI01000018_01286376_01296170 NA coding upstream 502059 1285588 ~ 1296170 (-)
G102600 NA non-coding downstream 136018 638352 ~ 640494 (-)
G102590 NA non-coding downstream 158558 617732 ~ 617954 (-)
G102547 NA non-coding downstream 197530 578676 ~ 578982 (-)
G102545 NA non-coding downstream 201124 575049 ~ 575388 (-)
G102528 NA non-coding downstream 217194 558940 ~ 559318 (-)
G102915 NA non-coding upstream 14712 798241 ~ 802937 (-)
G102949 NA non-coding upstream 21584 805113 ~ 877249 (-)
G102955 NA non-coding upstream 26391 809920 ~ 811731 (-)
G102995 NA non-coding upstream 85666 869195 ~ 869917 (-)
G103028 NA non-coding upstream 165711 949240 ~ 949641 (-)
G103842 NA other upstream 1175968 1959497 ~ 1960058 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other upstream 1602679 2389201 ~ 2488018 (-)
G104968 NA other upstream 2698575 3482104 ~ 3500514 (-)
G105104 NA other upstream 3224168 4007697 ~ 4017817 (-)
G105200 NA other upstream 3459938 4243467 ~ 4246010 (-)

Expression


Co-expression Network