CI01000018_03991163_03994220


Basic Information

Item Value
gene id CI01000018_03991163_03994220
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 3990550 ~ 3994238 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_03991163_03994220.mRNA
ACTGTCATTGTCACCAGCATGCCCTTTTCGCAACAGTCCCAAGAGACCATGCCTGGATCAGATGCTAATGTCAGAATCACGGCTAATTCCACTGTGCCTGTCACATCCTTCGTTTCTTCAGCTGCAATAACGTGGCTGCTGGGTCCGGAGGGGTCTCGTCAACAACGTGATGGGCAGTTTTCCACGCTTTGGGTCAGAGGGTTATTATCTCTTCCTGTCAGGAATGTCAGGAATTTCCTGCGCTTTCCTCTTCCGGCAGTGAGAGCATAGAAACCGCGCCCACCCATGTGACCGTTCAGCATCAGATTACCTCACTCGCAGACTGTGGGAATGGTCCGCACACGATGAAAACAAAGCTTCAGCCAGGGTTCCATTTGCTAAAATGGAAACTGCAGTATGAATTTGTCTTTGCAACTCTTGTTTTGTATATTGATATTCCCTGTGCATTTCTGTTTTTGTGCATTGTGATTTACTAAAAAGACAGCTGTCAATCAAACATCAGCATTTTAGGACCGTCAGGACTTGTAGACTTGGTTTTCCATCATTTGGTGTCTGCAGGATTCAGAGTTCTCCAATGTCTCCTGTGGTATAGGCTTGGATATTGTTTGAATTTTAGCAAATCCGATTCTTATCGATTCCCAGTTTTGATTCCAATATGGTAAAAAAAAAATGAAGTCAAACATTTAGATATCAAACATATTTATTCTCCGTCTTTTTGCAAAACATTCTGTTGCAGCTGAATACTATGAACAAAAATCAGCAGCGTGAACAACCAACTAATAAACTAGACTAACTAATGTAAATTTCAAACATTATTGAAAACAAGTAAACAGTCAGTAATACAATAAGAGCAATTAAGCAAATTAGTAATAGCACAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_03991163_03994220.mRNA True 883 mRNA 0.41 3 3990550 3994238

Neighbor

gene id symbol gene type direction distance location
CI01000018_03965992_03984331 NA coding downstream 5031 3965939 ~ 3985519 (-)
CI01000018_03942344_03955439 VILL coding downstream 35111 3942087 ~ 3955439 (-)
CI01000018_03888251_03907553 DLEC1 coding downstream 81375 3887539 ~ 3909175 (-)
CI01000018_03814990_03841716 MAP3K20 coding downstream 148834 3814791 ~ 3841716 (-)
CI01000018_03802116_03809432 CRY-DASH coding downstream 181118 3801686 ~ 3809432 (-)
CI01000018_04041639_04049792 NA coding upstream 46592 4040830 ~ 4049792 (-)
CI01000018_04075425_04081550 NKTR coding upstream 81167 4075405 ~ 4081550 (-)
CI01000018_04118240_04160401 VIPR1B, VIPR1 coding upstream 123749 4117987 ~ 4160401 (-)
CI01000018_04221457_04229417 NA coding upstream 226998 4221236 ~ 4229417 (-)
CI01000018_04231186_04233076 NA coding upstream 236681 4230919 ~ 4233076 (-)
G104963 NA non-coding downstream 178004 3811411 ~ 3812546 (-)
G105090 NA non-coding downstream 286651 3703444 ~ 3703899 (-)
G105084 NA non-coding downstream 299192 3691083 ~ 3691358 (-)
G105079 NA non-coding downstream 309039 3681192 ~ 3681511 (-)
G105077 NA non-coding downstream 310569 3679304 ~ 3679981 (-)
G105115 NA non-coding upstream 90305 4084543 ~ 4085146 (-)
G105140 NA non-coding upstream 92288 4086526 ~ 4086789 (-)
G105142 NA non-coding upstream 92906 4087144 ~ 4087354 (-)
G105141 NA non-coding upstream 95152 4089390 ~ 4092340 (-)
G105146 NA non-coding upstream 102094 4096332 ~ 4096565 (-)
G104968 NA other downstream 490036 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 1589647 2389201 ~ 2488018 (-)
G103842 NA other downstream 2030492 1959497 ~ 1960058 (-)
G105104 NA other upstream 13459 4007697 ~ 4017817 (-)
G105200 NA other upstream 249229 4243467 ~ 4246010 (-)
CI01000018_04856240_04875704 DAP other upstream 860843 4855081 ~ 4876532 (-)
CI01000018_06021105_06025859 NA other upstream 1897098 6020861 ~ 6025876 (-)
G106538 NA other upstream 2536209 6530447 ~ 6533512 (-)

Expression


Co-expression Network