CI01000018_05667742_05668807


Basic Information

Item Value
gene id CI01000018_05667742_05668807
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 5667619 ~ 5669240 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_05667742_05668807.mRNA
AGTTTTTAATATCCAGGTTGCATTAAGGAAGATAAATTGCCGTCCCAGCGCAATCTGACTGCTAACACAGAGACGATCTATTACAATATCAGCTTTTGTCCATGTCTCTTCTAATTAGATTCTCAAACGGATGCCGGATCAATCAATAATTTTAATTTCACCTACCCCCTTTTCACCGATGTTTGTTTTTTAACGGAAAACAAAATGACAGAACAAAAGGCAGTAATTTATTCGGAACGAGCTCCGGTTCCCGCAGACAAGCTCGCAGCCCATCGGTAACAGACTGCGGGCTGCAGACTCGCACCGTTCTAATTAACATGCAGATATGCATCACCTCATTGGCAATTCAAATTGTGCTTCCCTGTAATGTACCTCAAAATTGTTCTACTTCAAACATTGCGTTTGATTTGCAAAGCCCCCTGGGTATCACATAATGTCTCTCTTTATCCAGACCATCAGACCAATCTGCTCTGACTCAACTCCTCCAACAGCTTTCTTCCTCCAAAACCCAGTTTGGTTACTCTGTGACGGGCTTTGTCCTCCTTGGCGGGTTTTCTCATGGCATCCCAAGCTGTTAAATATGGTGGCTTTCCGGAAGACTTCATTTCCATGGCACACGGGCAGGCGGGCGGACGCGTGTCTGTCTACTCAGCACATTATTAGCATGCAGTGCATATCCACAGTCATGAATGCCAGCCTCCCATTAGGCTCAGTTTTGGTCCCTCCCCGTACACGCGCTCCCGTTTGCGGAAGTTCTTATTGTTGCGTATGGAGCACACGTGAGTGTTCTGCTCGTCAGCAGTGGCAGGGGGCCCAGTGGAGCAACAAGTGGCAGAATCTGCGGTGTGCAGTTATTCAGCGTGTTCGCAGCAGCAGGGCTGGCATGGCGCCAAATCTGCCATCTGCTTCCTTCACATGCGCTTTCCCATCTTGCCAATTTGCTCATAATGTTACGTGCCTCCCATCCTCATTTGCTTGTCAGAGGCGGGTGGCACGTGTTCCTGCCCCCGCCGCGATAAGGGCTCTCCGAGGGCCAGCCGTCTGCTCTTACCTCCAAGAGCTCTGCCACCTAGTCAGCCTTCTCCCTGCTTCCAGCCTGCTGCCTGTCTGCCTTCTGCTTGCCCGGGAGAAGGAGGGAATGCTGTGGGATCTAATGCGCACGAGCCGTTTGAAGCTGCGGAAAAGTGAATAATCAATTAAGTATTGATTTCTTGTAAGATTTTGTAAATTTCAAGGCAAGACAAAGAGGATAGCTTAAGGGAAGAGCAGCAGGGACTTGGTGTAAATTAGCCAACAAACAGCGCGGCGGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_05667742_05668807.mRNA True 1315 mRNA 0.49 2 5667619 5669240

Neighbor

gene id symbol gene type direction distance location
CI01000018_05588289_05597432 NA coding downstream 69797 5587959 ~ 5597822 (-)
CI01000018_05528561_05576788 ZFHX4 coding downstream 90831 5528561 ~ 5576788 (-)
CI01000018_05472889_05494284 NA coding downstream 172249 5472651 ~ 5495370 (-)
CI01000018_05412935_05458370 NA coding downstream 209177 5412710 ~ 5458442 (-)
CI01000018_05222497_05243379 ZC2HC1A coding downstream 424240 5222497 ~ 5243379 (-)
CI01000018_05803227_05816159 HNF4G coding upstream 133669 5802909 ~ 5816493 (-)
CI01000018_05820608_05821533 NA coding upstream 150670 5819910 ~ 5821533 (-)
CI01000018_05827740_05839214 PIGN coding upstream 158336 5827576 ~ 5839214 (-)
CI01000018_05864737_05869576 MCMDC2 coding upstream 195215 5864455 ~ 5869576 (-)
CI01000018_05870993_05880212 SGK3 coding upstream 201073 5870313 ~ 5880705 (-)
G105939 NA non-coding downstream 1531 5665853 ~ 5666088 (-)
G105526 NA non-coding downstream 173513 5493836 ~ 5494106 (-)
G105464 NA non-coding downstream 177884 5365050 ~ 5489735 (-)
G105219 NA non-coding downstream 383233 5282706 ~ 5284386 (-)
G105413 NA non-coding downstream 409108 5258312 ~ 5258511 (-)
G105948 NA non-coding upstream 27518 5696758 ~ 5697110 (-)
G105956 NA non-coding upstream 52278 5721518 ~ 5721849 (-)
G106013 NA non-coding upstream 129917 5799157 ~ 5799386 (-)
G106017 NA non-coding upstream 178105 5847345 ~ 5847559 (-)
G106077 NA non-coding upstream 373920 6043160 ~ 6043390 (-)
CI01000018_04856240_04875704 DAP other downstream 791780 4855081 ~ 4876532 (-)
G105200 NA other downstream 1421609 4243467 ~ 4246010 (-)
G105104 NA other downstream 1649802 4007697 ~ 4017817 (-)
G104968 NA other downstream 2167105 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 3266716 2389201 ~ 2488018 (-)
CI01000018_06021105_06025859 NA other upstream 222096 6020861 ~ 6025876 (-)
G106538 NA other upstream 861207 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 971372 6639207 ~ 6649971 (-)

Expression


Co-expression Network