CI01000018_05905787_05908656


Basic Information

Item Value
gene id CI01000018_05905787_05908656
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 5905525 ~ 5908682 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000018_05905787_05908656.mRNA
AGCGTATCTCACAAACAAGCATCAGGATGCAACAGCACATTTACATGCAAAGCAATGGACAGTTTGAGGTTTTCACAACCGTTTCCTCTCCACAAGGACCACTTGGGCAAGCTGAGGGTGACGTCATTGAAGTACTCTCAAAACATGAATCCAGGTGGTCCGGGCGCGTGCAGGACGACCAGCAGGGCTACTTCTCAGAGCAGCTGAGTCATGACAAACATAAATCTTTTGTTCCTAGAGGCATGAGCTCACGGCCGAGGGGCTTAGGACTGCACTGTTCAAACCAAGCGGGGACTGTCGTGCTCCTGGGGGAGGGCACGGGCAGAGGCAGGCTACAAGTCCCCTGGGGGGAAAATAGGGAGGAGGGTGCTTTCCTGGCGCTCAGATGCGAGGCCCAGGCACACAGCTCTCCCAGCTTGCTCCAGAGAATCTTGTCCAAGCACTGTAGGAAAAGCCACTGCCAGGGGGCCACCAATGGGGCTTCTGAGGCTGATTGAATGACTCCTCCTTTATAGAAGGCTTAGGAGAAATAGTACTGTAGCTGTTTTGTGTATGTGCATCCTTAATAGCTACATTGACTCATTAACAACCCTGTGATACTATACTGGTGGAAGCTGGGGGCAATTATTGTCCTTTGTAACTCACACACTACTACATGTGATCTTTTGGTATAAGGAATATGTAAACATGCCAAAAATAACAGCATTATCAACATATTTGCATTTAGAAAGAATTCATTGTAATATTGAATTTAATAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000018_05905787_05908656.mRNA True 759 mRNA 0.48 4 5905525 5908682

Neighbor

gene id symbol gene type direction distance location
CI01000018_05870993_05880212 SGK3 coding downstream 24820 5870313 ~ 5880705 (-)
CI01000018_05864737_05869576 MCMDC2 coding downstream 35949 5864455 ~ 5869576 (-)
CI01000018_05827740_05839214 PIGN coding downstream 66311 5827576 ~ 5839214 (-)
CI01000018_05820608_05821533 NA coding downstream 83992 5819910 ~ 5821533 (-)
CI01000018_05803227_05816159 HNF4G coding downstream 89032 5802909 ~ 5816493 (-)
CI01000018_05910381_05911415 RRS1 coding upstream 1436 5910118 ~ 5911415 (-)
CI01000018_05969322_05974836 ARX, ARXA coding upstream 60607 5969289 ~ 5975001 (-)
CI01000018_05990359_05991280 NDUFB4 coding upstream 81614 5990296 ~ 5991404 (-)
CI01000018_05992061_05992357 NA coding upstream 83313 5991995 ~ 5992357 (-)
CI01000018_05993799_05995338 NA coding upstream 85059 5993741 ~ 5995338 (-)
G106017 NA non-coding downstream 57966 5847345 ~ 5847559 (-)
G106013 NA non-coding downstream 106139 5799157 ~ 5799386 (-)
G105956 NA non-coding downstream 183676 5721518 ~ 5721849 (-)
G105948 NA non-coding downstream 208415 5696758 ~ 5697110 (-)
G105939 NA non-coding downstream 239437 5665853 ~ 5666088 (-)
G106077 NA non-coding upstream 134478 6043160 ~ 6043390 (-)
G106096 NA non-coding upstream 266750 6175432 ~ 6175649 (-)
G106477 NA non-coding upstream 344117 6252799 ~ 6253046 (-)
G106479 NA non-coding upstream 359785 6268467 ~ 6268704 (-)
G106498 NA non-coding upstream 472071 6380753 ~ 6383489 (-)
CI01000018_04856240_04875704 DAP other downstream 1029686 4855081 ~ 4876532 (-)
G105200 NA other downstream 1659515 4243467 ~ 4246010 (-)
G105104 NA other downstream 1887708 4007697 ~ 4017817 (-)
G104968 NA other downstream 2405011 3482104 ~ 3500514 (-)
CI01000018_02389202_02488018 CNTNAP2, CNTNAP2A other downstream 3504622 2389201 ~ 2488018 (-)
G106538 NA other upstream 621765 6530447 ~ 6533512 (-)
CI01000018_06639339_06649926 NA other upstream 731930 6639207 ~ 6649971 (-)

Expression


Co-expression Network