Gene
RNA
| Item | Value |
|---|---|
| gene id | G103965 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 2304344 ~ 2304972 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: leucine-rich repeat extensin-like protein 3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU118244 | True | 629 | lncRNA | 0.42 | 1 | 2304344 | 2304972 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_02282563_02282856 | NA | coding | downstream | 21272 | 2282554 ~ 2283072 (-) |
| CI01000018_02195642_02198053 | SKIDA1 | coding | downstream | 104944 | 2193361 ~ 2199400 (-) |
| CI01000018_02138741_02148435 | ARMC3 | coding | downstream | 155909 | 2138644 ~ 2148435 (-) |
| CI01000018_02135812_02137218 | MSRB2 | coding | downstream | 167126 | 2135750 ~ 2137218 (-) |
| CI01000018_02129101_02134686 | C8G | coding | downstream | 169658 | 2128393 ~ 2134686 (-) |
| CI01000018_02356445_02369996 | CUL1B, CUL1A, MGC114992, CUL1.L, CUL1 | coding | upstream | 50954 | 2355926 ~ 2370015 (-) |
| CI01000018_02381118_02382741 | NA | coding | upstream | 75926 | 2380898 ~ 2382749 (-) |
| CI01000018_02389202_02488018 | CNTNAP2, CNTNAP2A | coding | upstream | 84230 | 2389201 ~ 2488018 (-) |
| CI01000018_02537614_02606018 | NA | coding | upstream | 232538 | 2537510 ~ 2606161 (-) |
| CI01000018_02613387_02620287 | CNTNAP2 | coding | upstream | 308052 | 2613024 ~ 2620287 (-) |
| G103964 | NA | non-coding | downstream | 288 | 2303840 ~ 2304056 (-) |
| G103963 | NA | non-coding | downstream | 1239 | 2302882 ~ 2303105 (-) |
| G103961 | NA | non-coding | downstream | 2343 | 2299811 ~ 2302001 (-) |
| G103944 | NA | non-coding | downstream | 38898 | 2265212 ~ 2265446 (-) |
| G103939 | NA | non-coding | downstream | 65322 | 2236859 ~ 2239022 (-) |
| G103966 | NA | non-coding | upstream | 1365 | 2306337 ~ 2307720 (-) |
| G103967 | NA | non-coding | upstream | 3312 | 2308284 ~ 2308850 (-) |
| G103969 | NA | non-coding | upstream | 11886 | 2316858 ~ 2317082 (-) |
| G103976 | NA | non-coding | upstream | 29725 | 2334697 ~ 2334901 (-) |
| G103859 | NA | non-coding | upstream | 34337 | 2339309 ~ 2343042 (-) |
| G103842 | NA | other | downstream | 344286 | 1959497 ~ 1960058 (-) |
| G104968 | NA | other | upstream | 1177132 | 3482104 ~ 3500514 (-) |
| G105104 | NA | other | upstream | 1702725 | 4007697 ~ 4017817 (-) |
| G105200 | NA | other | upstream | 1938495 | 4243467 ~ 4246010 (-) |
| CI01000018_04856240_04875704 | DAP | other | upstream | 2550109 | 4855081 ~ 4876532 (-) |
