Gene
RNA
| Item | Value |
|---|---|
| gene id | G105277 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 4285739 ~ 4285992 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106597942, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119664 | True | 254 | lncRNA | 0.41 | 1 | 4285739 | 4285992 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_04248388_04258010 | KPNA1 | coding | downstream | 27701 | 4248122 ~ 4258038 (-) |
| CI01000018_04239141_04241413 | CCDC58 | coding | downstream | 44326 | 4238253 ~ 4241413 (-) |
| CI01000018_04231186_04233076 | NA | coding | downstream | 52663 | 4230919 ~ 4233076 (-) |
| CI01000018_04221457_04229417 | NA | coding | downstream | 56322 | 4221236 ~ 4229417 (-) |
| CI01000018_04118240_04160401 | VIPR1B, VIPR1 | coding | downstream | 125338 | 4117987 ~ 4160401 (-) |
| CI01000018_04307560_04321214 | QTRTD1, QTRT2 | coding | upstream | 20929 | 4306921 ~ 4322286 (-) |
| CI01000018_04336914_04342114 | NA | coding | upstream | 50597 | 4336589 ~ 4342114 (-) |
| CI01000018_04344907_04359005 | GRAMD1C | coding | upstream | 58099 | 4344091 ~ 4359005 (-) |
| CI01000018_04361150_04364887 | ATP6V1A.L, ATP6V1AA, ATP6V1AB, ATP6V1A | coding | upstream | 74627 | 4360619 ~ 4364887 (-) |
| CI01000018_04397198_04411105 | BOC | coding | upstream | 110657 | 4396649 ~ 4411105 (-) |
| G105185 | NA | non-coding | downstream | 47604 | 4234605 ~ 4238135 (-) |
| G105263 | NA | non-coding | downstream | 66830 | 4218678 ~ 4218909 (-) |
| G105261 | NA | non-coding | downstream | 74481 | 4210897 ~ 4211258 (-) |
| G105259 | NA | non-coding | downstream | 78602 | 4206905 ~ 4207137 (-) |
| G105148 | NA | non-coding | downstream | 185582 | 4099921 ~ 4100157 (-) |
| G105304 | NA | non-coding | upstream | 146199 | 4432191 ~ 4432482 (-) |
| G105306 | NA | non-coding | upstream | 158810 | 4444802 ~ 4445367 (-) |
| G105307 | NA | non-coding | upstream | 168269 | 4454261 ~ 4454478 (-) |
| G105213 | NA | non-coding | upstream | 298636 | 4584628 ~ 4587775 (-) |
| G105199 | NA | non-coding | upstream | 326705 | 4612697 ~ 4615380 (-) |
| G105200 | NA | other | downstream | 39729 | 4243467 ~ 4246010 (-) |
| G105104 | NA | other | downstream | 267922 | 4007697 ~ 4017817 (-) |
| G104968 | NA | other | downstream | 785225 | 3482104 ~ 3500514 (-) |
| CI01000018_02389202_02488018 | CNTNAP2, CNTNAP2A | other | downstream | 1884836 | 2389201 ~ 2488018 (-) |
| G103842 | NA | other | downstream | 2325681 | 1959497 ~ 1960058 (-) |
| CI01000018_04856240_04875704 | DAP | other | upstream | 569089 | 4855081 ~ 4876532 (-) |
| CI01000018_06021105_06025859 | NA | other | upstream | 1605344 | 6020861 ~ 6025876 (-) |
| G106538 | NA | other | upstream | 2244455 | 6530447 ~ 6533512 (-) |
| CI01000018_06639339_06649926 | NA | other | upstream | 2354620 | 6639207 ~ 6649971 (-) |
