Gene
RNA
| Item | Value |
|---|---|
| gene id | G105328 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000018 |
| NCBI id | null |
| chromosome length | 7078422 |
| location | 4621351 ~ 4621628 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU119717 | True | 278 | lncRNA | 0.34 | 1 | 4621351 | 4621628 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000018_04604468_04611851 | USP12.S, USP46, USP12, USP12.L, RGD1561481, USP12A, USP12-LIKE | coding | downstream | 9500 | 4603787 ~ 4611851 (-) |
| CI01000018_04595424_04596449 | GPR12 | coding | downstream | 23764 | 4594465 ~ 4597587 (-) |
| CI01000018_04557779_04561445 | RNF6 | coding | downstream | 59354 | 4557636 ~ 4561997 (-) |
| CI01000018_04491510_04539751 | ATP8A2 | coding | downstream | 81600 | 4491235 ~ 4539751 (-) |
| CI01000018_04464837_04473051 | NA | coding | downstream | 148300 | 4464638 ~ 4473051 (-) |
| CI01000018_04627321_04645724 | LNX2A, LNX2 | coding | upstream | 5541 | 4627169 ~ 4646182 (-) |
| CI01000018_04657706_04674073 | NA | coding | upstream | 35943 | 4657571 ~ 4674073 (-) |
| CI01000018_04738374_04757471 | NA | coding | upstream | 116652 | 4738280 ~ 4757471 (-) |
| CI01000018_04759598_04770734 | TMPRSS7 | coding | upstream | 137881 | 4759509 ~ 4770734 (-) |
| CI01000018_04773554_04792048 | SPATA13 | coding | upstream | 151598 | 4773226 ~ 4792048 (-) |
| G105199 | NA | non-coding | downstream | 5971 | 4612697 ~ 4615380 (-) |
| G105213 | NA | non-coding | downstream | 33576 | 4584628 ~ 4587775 (-) |
| G105307 | NA | non-coding | downstream | 166873 | 4454261 ~ 4454478 (-) |
| G105306 | NA | non-coding | downstream | 175984 | 4444802 ~ 4445367 (-) |
| G105304 | NA | non-coding | downstream | 188869 | 4432191 ~ 4432482 (-) |
| G105209 | NA | non-coding | upstream | 28253 | 4649881 ~ 4651347 (-) |
| G105336 | NA | non-coding | upstream | 120033 | 4741661 ~ 4741921 (-) |
| G105350 | NA | non-coding | upstream | 145983 | 4767611 ~ 4768386 (-) |
| G105413 | NA | non-coding | upstream | 636684 | 5258312 ~ 5258511 (-) |
| G105219 | NA | non-coding | upstream | 661078 | 5282706 ~ 5284386 (-) |
| G105200 | NA | other | downstream | 375341 | 4243467 ~ 4246010 (-) |
| G105104 | NA | other | downstream | 603534 | 4007697 ~ 4017817 (-) |
| G104968 | NA | other | downstream | 1120837 | 3482104 ~ 3500514 (-) |
| CI01000018_02389202_02488018 | CNTNAP2, CNTNAP2A | other | downstream | 2220448 | 2389201 ~ 2488018 (-) |
| G103842 | NA | other | downstream | 2661293 | 1959497 ~ 1960058 (-) |
| CI01000018_04856240_04875704 | DAP | other | upstream | 233453 | 4855081 ~ 4876532 (-) |
| CI01000018_06021105_06025859 | NA | other | upstream | 1269708 | 6020861 ~ 6025876 (-) |
| G106538 | NA | other | upstream | 1908819 | 6530447 ~ 6533512 (-) |
| CI01000018_06639339_06649926 | NA | other | upstream | 2018984 | 6639207 ~ 6649971 (-) |
