G106538


Basic Information

Item Value
gene id G106538
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 6530447 ~ 6533512 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU121114
TTAACTCTTGATACATATGGGCTTCTCTATATCTTTCACTCCTTTATTCATTGAGCAGTGAGCAGGCAAAAAAACAGACCTGTGTGTAGAGTGATGTCATGCTACATTCAGAAATATCCGCTCAGTATGTCCAGGTTAGCAAGAGTAGTACAAATCACTGTGAAAAGAGGAGGATACTCATGATCCGGAGATTTATTTTTTGCAAGTCGTGTTTTCCAAAAGACAAAACAAGCAGTGCACACATATCCACAGTGAGGTCACAGGGAGGTCCTTGTCCAATATAAAAGAGTTACAAAAGTGGAGATTCAGTAAAAAGAACGATTTTCTTTTCATCAATATCAATAGGAAGTCACGTTGTGTGATACGAAAGTGTGTCTCGAACAAAAGGCTGTGTTCCCTGATCCAGTTTGAGTGTACAAGACTCCATGCAGCTTTATTTAGGAGTGTCAGAAGTGCTTGGTTTCATCTCACACAGTTCTAAAATTCATTATATGTAAAATACTGGAGAGATGAAGATCGCAGCTGCGTTTTACACAGTGCTTATGGGATGACAAAGCAAGAAATTACCACAGTTTCACATATTCCATTGGAAGGGAATGAGAAGCTTTTTGATATTAAACATTCTTCTTAGGATCAGCATTCTCACCATATTATTCCTCTTTGAAAGGCTGGTAAGGTAAATAAACCCTCAAGCTTACATTATTATGAATGTCATGTGTTACATATTGCAGTGCATTCTACAAAACTCTTAATTATATTAGGGTGTAATATGCAACATCACAATTCATTTCAAAGATGTAAAAACAGTTAAGATATAGTCCTCAGTAGACAGGTGAAATCAAAAAAGTGGAGGTTGATTGCTTCATATCAAAAAACATTGTTTTGGCCTAAAGCTCTTGTGATAGATTTCTATTGTCAGAAACATCTGATGGGCCTCCAAGCTTTCTACTTCCTGCTTTGTGAGGTGGGGGTGCTTTTGTTGCCGGAACGACGGACGGGAACCTTCGAGACAGGGATTCGAGTGCGTGGTGGGGCATCAGTCTTTTTAGGAGGAGTGGTTGAAGTGGGGCTAAGATTAGAAGACAGCGCTCCTTGGCTGGAAGAGTGGGATGGTGGTGTTTGCCTCACACTAATGGGGATCTTGGAATCTCGAGGCAGGCTGGTGCTGCCTTTCATGGATCGGAATGAGGAAGTGATGGAAGACGAGCATTTCGGAGAAGGTAAGTTCATTTTTAGGTCACCTGCAGATTTTGTTGGTGAACTCACGTCATCGTCTGAGCCAGCAGCACTAGGGCTGTCGGGGTCATAGAGGTCGTAGAGCGCATCACCAGAGCAGCTATCCTTCAGCAGGCCGTCCCGACGGAGGAAGGTGCTGTCCTCATCCTCTGGGCCAGGTGTGGGAGAGTCCCAGTAGCCTTCATCACTTGGTGGGGCATCATGGAGTTCTTTATCAACAGGAGGAGTCTTCAACCTTCTGGGGCAACATATGCCATAGACCCTGCATGTCAGCATCATCAACACCCTCAGGACTAGCCATCTCCTCCCCTCCACCCATGTAAGCAACAACTCCACTACCCTGTGGCTTTTTGGGGGCTGCACGTGGTCTTTGGTGGGCTGGAATGTAGCAAGAAGCATGGATAGATGTAAGACTACTGACCTGGGGAGGAAGTGGAGGCTTGGCAGGAGAGCATCTCTCAGAGTTCGTCCCGGCTCCACTTAATCTGCGACCCATGCAGCCCCCGCTACTGCTACCAGTTCCACTGCTCGTGGCACTTCCCCCATTCCCAGAATCCTCTTCTGGGTCAGCGATGATGTCACCACAGCCTGTTAAAGAATCAAAGCTTTTTAGTGAAGTAACATCAGTGAACATGGAGCATAAGCGATCCACAGATTGCTCGGATTGTGGGTCAGCTGTGCTGTGCTCCATTGGAGGGGTCAAAGCACAGGTCGGAATGGAGGACAAAAGTTCTGAACCGTTGTTTTTATCATGTTGGAGCCCTCCTGTCTGGACTCGGACTGGAGAAGGAGCAGGAGACTCTTCAGTGACTGTATGTTGTTGGGAAAGAGAAGGACCAGAGTAATCACACTCCACTTCATTAGTACCCTGAAATTCTTGCATAGATGTTGCCTTCCATTTCTCAGCATCCCCTGGGAGAGGAGTCTTCTCAAACACTTGTGGCAGGGGCTCAAGAGTCAGTGTCATGTCCTTCTCTGTTTCCACACTGCCAGAGCTAGGGGAAAGTATTAGTTCTCCCTCCTTCACCTCTTTGGCTACCTCCACAGAGTCCTCTTGAACCTGGGGCTTCCGCCGCCAACGCATGCTGCTGAACAGCCCCTTAAGTCCTCGTCCTCGTCGTCCCACCGTAGTAGTTCCATCCCCTGCACGGCTGCTGCTCCGGCGCAGTAAAGAGAAGAAGCTGAAAGACTTGGTGATGGAGCTGCGGAGGGGGGCGTTGGATACACCATCTGGTGTGCCGGCGTGGAGCTGGTCACTACTGGCAGATTCCTCTTTCCGGTGGCCGTCAAGCTCCGAAGGAGTGTCCGTTATTAAGCCATCATGGGTTTTGCTCCTAACGAGCTCTAGCGTCTTGCCAGCGGCTTTACCGGTGGACTCCCCTTTGTTCCTGACAGAGAAAATACTCGGCATGCTGCTGCCGGACTTGCGCTTGCTGAACAGCTTGAAGGCGGCTTTGTTGAGCTTTCCTGGTGGCTGTGGGTCACATGGAGGCGGTTCACTGCATTCGTTTTGAACCTCCATCTCTGCCACTATGTCTACTGCACCCTCTGTTTTCTTTCTTTCTTCTTCTGCCTTTATTTTACCTTGTCTCTAACTGCTTCTTTCCTTTTCCTCTCCCTTTCCACTTCTATCCGCTGCCTTTGCTTGTTGGTGTTCTCCCCGCCTCGCTCTCTTTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU121114 True 2914 TUCP 0.48 2 6530447 6533512

Neighbor

gene id symbol gene type direction distance location
CI01000018_06503908_06515370 NUP58 coding downstream 15077 6503782 ~ 6515370 (-)
CI01000018_06493607_06502730 ZDHHC20 coding downstream 27717 6493345 ~ 6502730 (-)
CI01000018_06484577_06490112 SLC51A coding downstream 40335 6484577 ~ 6490112 (-)
CI01000018_06475800_06482278 PDK3, PDK3A coding downstream 48156 6475309 ~ 6482291 (-)
CI01000018_06425724_06426234 CRH, CRHB coding downstream 104213 6425346 ~ 6426234 (-)
CI01000018_06547019_06585316 PHLDB2 coding upstream 12874 6545849 ~ 6585316 (-)
CI01000018_06598234_06605351 PLCXD2 coding upstream 64469 6597981 ~ 6605934 (-)
CI01000018_06639339_06649926 NA coding upstream 105695 6639207 ~ 6649971 (-)
CI01000018_06665847_06684600 NA coding upstream 132275 6665787 ~ 6684600 (-)
CI01000018_06696391_06705674 PTCHD1 coding upstream 162246 6695758 ~ 6705674 (-)
G106495 NA non-coding downstream 38684 6491240 ~ 6491763 (-)
G106484 NA non-coding downstream 56022 6471528 ~ 6474425 (-)
G106498 NA non-coding downstream 146958 6380753 ~ 6383489 (-)
G106479 NA non-coding downstream 261743 6268467 ~ 6268704 (-)
G106477 NA non-coding downstream 277401 6252799 ~ 6253046 (-)
G106539 NA non-coding upstream 2831 6536343 ~ 6536648 (-)
G106541 NA non-coding upstream 4371 6537883 ~ 6538167 (-)
G106543 NA non-coding upstream 6924 6540436 ~ 6540674 (-)
G106579 NA non-coding upstream 174272 6707784 ~ 6707988 (-)
CI01000018_06021105_06025859 NA other downstream 504571 6020861 ~ 6025876 (-)
CI01000018_04856240_04875704 DAP other downstream 1654608 4855081 ~ 4876532 (-)
G105200 NA other downstream 2284437 4243467 ~ 4246010 (-)
G105104 NA other downstream 2512630 4007697 ~ 4017817 (-)
G104968 NA other downstream 3029933 3482104 ~ 3500514 (-)

Expression


Co-expression Network