XLOC_008109 (dre-mir-194b)



Basic Information


Item Value
gene id XLOC_008109
gene name dre-mir-194b
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 45468955 ~ 45469031 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00015826
GCTCGCTGGGTGTAACAGCCGCTCCATGTGGAAAATGCATTCAAGTGCCCGTGGATAAGCTGTTACCTGCAGAGAGT

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000088287

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00015826 True 77 miRNA 0.53 1 45468955 45469031

Neighbor


gene id symbol gene type direction distance location
XLOC_008108 ehd1a coding downstream 4843 45434680 ~ 45464112 (-)
XLOC_008107 si:ch211-168f7.5 coding downstream 74116 45365157 ~ 45394839 (-)
XLOC_008106 zgc:153018 coding downstream 122397 45339986 ~ 45346558 (-)
XLOC_008105 shisa3 coding downstream 261956 45200278 ~ 45206999 (-)
XLOC_008104 NA coding downstream 491881 44975416 ~ 44977074 (-)
XLOC_008110 si:ch211-114c17.1 coding upstream 19891 45488922 ~ 45512807 (-)
XLOC_008111 ganab coding upstream 45438 45514469 ~ 45551572 (-)
XLOC_008112 ints5 coding upstream 82962 45551993 ~ 45558490 (-)
XLOC_008113 scyl1 coding upstream 106004 45575035 ~ 45595732 (-)
XLOC_008114 si:ch211-276i12.9 coding upstream 134708 45603739 ~ 45604667 (-)
XLOC_007641 CU855896.1 misc downstream 43061115 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 43061524 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 43061883 2406945 ~ 2407072 (-)
XLOC_008100 CABZ01078505.1 non-coding downstream 951807 44517029 ~ 44517148 (-)
XLOC_008099 CT998554.1 non-coding downstream 1192350 44276488 ~ 44276605 (-)
XLOC_008098 NA non-coding downstream 1799810 43667449 ~ 43669145 (-)
XLOC_008097 CU467639.1 non-coding downstream 1853141 43614697 ~ 43615814 (-)
XLOC_008115 NA non-coding upstream 161500 45630531 ~ 45639806 (-)
XLOC_008118 NA non-coding upstream 574838 46043869 ~ 46045904 (-)
XLOC_008121 NA non-coding upstream 645629 46114660 ~ 46117359 (-)
XLOC_008131 NA non-coding upstream 964451 46433482 ~ 46437896 (-)
XLOC_008135 NA non-coding upstream 1032848 46501879 ~ 46502192 (-)

Expression



Co-expression Network