XLOC_008116 (si:dkey-226n24.1)


Basic Information

Item Value
gene id XLOC_008116
gene name si:dkey-226n24.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 45698879 ~ 45702721 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015836
CACTTCCCATAAATTCTTCTATCATTTCCGTGACGTCTGAGTCCATCGTCTCTGTACCTGTATTTATTCCTCAGAACACAGCGGTTTActtaaataacaatatatttttaagagTACATTCATGGCTACCGTGAGTCTCTGGACAGAAGTGTGTCAAGgaaaaaaagagaagaggAAATGGGCTGAACACTACACCATTTCACGAGGGAAGTTAAGTCATGAAGCTGTGGCTGGCTTCTCCGCCTCTGGCTCTGATCCCGGGGTCTCAGCAGACGCGTCGCCCACCTGAGCGAACTGAAGAAGTTTCATCATCTTTTCTTTGGTCTCCAGCAATGTCTCCTTCACTCCCTTCTCTAGGATGTATCCTTCAGTCTCGATCTCCACATTCTCCTGTCCCAGCACTCCCTCCATTGCAGTCTGCAGATAGCGCAGACCCACCAGAATGGCCATCTGAGGGCAGAAAAGGGAAGCGGGTCAGTGTTTGGTGACCTTTTTATCAGCTTTTCCCTATCTTTCCTTCAGATTAATGTCCTTCAATCCCCTTTGTTTAATCCTGAGTAAAGGAATGTTTCACATTTATAATTAAGAGGCACATTTATGGCCTGTTATAGCAAGAATGACCAACCAAGATGTATGTTAGCCACACCAACATGTAATATCATCCCTGAAGTTTCATTTATGTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101564

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015836 True 683 mRNA 0.44 3 45698879 45702721

Neighbor

gene id symbol gene type direction distance location
XLOC_008115 NA coding downstream 59073 45630531 ~ 45639806 (-)
XLOC_008114 si:ch211-276i12.9 coding downstream 94212 45603739 ~ 45604667 (-)
XLOC_008113 scyl1 coding downstream 103147 45575035 ~ 45595732 (-)
XLOC_008112 ints5 coding downstream 140389 45551993 ~ 45558490 (-)
XLOC_008111 ganab coding downstream 147307 45514469 ~ 45551572 (-)
XLOC_008117 macrod1 coding upstream 86733 45789454 ~ 45967981 (-)
XLOC_008118 NA coding upstream 341148 46043869 ~ 46045904 (-)
XLOC_008119 elf2a coding upstream 345040 46047761 ~ 46070802 (-)
XLOC_008120 NA coding upstream 371590 46074311 ~ 46113404 (-)
XLOC_008121 NA coding upstream 411939 46114660 ~ 46117359 (-)
XLOC_007641 CU855896.1 misc downstream 43291039 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 43291448 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 43291807 2406945 ~ 2407072 (-)
XLOC_008109 dre-mir-194b non-coding downstream 229848 45468955 ~ 45469031 (-)
XLOC_008104 NA non-coding downstream 721805 44975416 ~ 44977074 (-)
XLOC_008100 CABZ01078505.1 non-coding downstream 1181731 44517029 ~ 44517148 (-)
XLOC_008099 CT998554.1 non-coding downstream 1422274 44276488 ~ 44276605 (-)
XLOC_008131 NA non-coding upstream 730761 46433482 ~ 46437896 (-)
XLOC_008135 NA non-coding upstream 799158 46501879 ~ 46502192 (-)
XLOC_008136 NA non-coding upstream 828198 46530919 ~ 46533561 (-)

Expression


Co-expression Network