XLOC_008127 (si:ch211-113d11.8)


Basic Information

Item Value
gene id XLOC_008127
gene name si:ch211-113d11.8
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 46250864 ~ 46259523 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015852
TGTGTATCTGAGAGTACAGGATAACACTCAGCTCATTTcttctaaatattttgtaaaagaGAAGAGCTGAGGGACAGAGGAGCAGAGATTTCCCTATACTGAGGTTTTACATAATGTGGATGAGAATGTCTCAGATTGCACAGATGCTGGTTTTTCTCTGCGTGCTGATTGGATGCTCAACGGCTTTCCCTCACTATGATGTCATCAGTgaagatgaagacataaaagatGTTAAACATGTGGAGAGAGAAAGACGAGATGCTGAAATAACTGACACGGATTTCACTCCACCAGTGTGTCGTATGGTAAATGGGAGTTTGGACTGTCCTTATCCATGTGGTAACACAACCTGGGAAGCGACGTACATCATGACAGATGGAAACGGATCAGGAATTGATCATCCCTCTTTTTCTGCTCACATTTCTGACGAAGGGAATAATGACTTCATCATTGACATCGATTCAACTGTGGATGAAAACGGATTCAATGCAACCCTGGTGAAATATATAGTTTCATGCTGCCTGAAAGACGTCCAGATCTCTGCGGTGGACAAGGCAGGCAACAAGGCAGAGTGTCCTTTGAGTATAAACCGACCTGTGACCACAATCAACCCAATGACTATCAGTCCCACATCCAGTAGCTCCACCACAGTCATCTCACTTTGGTCAGGTTTAATAGTGATGATGTTTAAATCTATGCTGCTTTAACATGCAGCAGCGTTTCTCAATCCCGGTCCTCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000105494

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015852 True 739 mRNA 0.43 3 46250864 46259523

Neighbor

gene id symbol gene type direction distance location
XLOC_008126 si:ch211-113d11.6 coding downstream 12678 46233704 ~ 46238186 (-)
XLOC_008125 si:ch211-113d11.5 coding downstream 22770 46221004 ~ 46228094 (-)
XLOC_008124 setd7 coding downstream 37293 46199941 ~ 46213571 (-)
XLOC_008123 zgc:113425 coding downstream 52491 46190807 ~ 46198373 (-)
XLOC_008122 mlsl coding downstream 77599 46157379 ~ 46173265 (-)
XLOC_008128 crybb1l1 coding upstream 42450 46301973 ~ 46310549 (-)
XLOC_008129 ccna2 coding upstream 95125 46354648 ~ 46374870 (-)
XLOC_008130 bbs7 coding upstream 115718 46375241 ~ 46395659 (-)
XLOC_008131 NA coding upstream 173959 46433482 ~ 46437896 (-)
XLOC_008132 fgfbp1b coding upstream 182094 46441617 ~ 46442459 (-)
XLOC_007641 CU855896.1 misc downstream 43843024 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 43843433 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 43843792 2406945 ~ 2407072 (-)
XLOC_008121 NA non-coding downstream 133505 46114660 ~ 46117359 (-)
XLOC_008118 NA non-coding downstream 204960 46043869 ~ 46045904 (-)
XLOC_008115 NA non-coding downstream 611058 45630531 ~ 45639806 (-)
XLOC_008109 dre-mir-194b non-coding downstream 781833 45468955 ~ 45469031 (-)
XLOC_008104 NA non-coding downstream 1273790 44975416 ~ 44977074 (-)
XLOC_008135 NA non-coding upstream 242356 46501879 ~ 46502192 (-)
XLOC_008136 NA non-coding upstream 271396 46530919 ~ 46533561 (-)
XLOC_008137 NA non-coding upstream 370378 46629901 ~ 46675850 (-)
XLOC_008145 CABZ01080059.1 non-coding upstream 2089964 48349487 ~ 48349602 (-)

Expression


Co-expression Network