XLOC_008133 (fgfbp2a)


Basic Information

Item Value
gene id XLOC_008133
gene name fgfbp2a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007125.7
NCBI id CM002898.2
chromosome length 52660232
location 46449070 ~ 46451249 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00015862
AGCACCTCAACATGTGGACAATCTCAAGCACACTTTTGCTGATCTGCTGCCTCCGAGCAGCTCTCGCTCAGTGGCAAGATGTGATCGAATTTCTTACGAAAGGCACTAAAGATGAATGCTACATGAGCGTGACCGGATCGGGGGATCTGACCAAGCTGCGCATCACCTGCCAGGGGGACGAACGCTCCTACTGGTGCGAATACCAGGGTAGACCCAAAGTCTGTCGCTCGTACAATGGCAACCCAGTGCATTACTACAGGCAGATCATGTGGAGCCTCCGCAAGCTGCCCAACGCTTGCCAGGGCCAGCGCGTCTATAAGCCTTTAATGTGCAAGAGAGCCACCGACGATGCTCAGATGGTCTTCACCACTTCATCCTCAGCAGATGCCGTGCCAAGAGACCGACCCGAGCCGATGAGACCAGCACAGAAACCCATGCCAAAGCCTACTAGGCCACAGCCGTTAAGAACTGCTCCAGCCAGGCCAAGTCCATACAAAGTTATCAAAGTCTACCCACCGAAGAAAGTTACACCCAGACCAACTGAGCCCGTGCCGACTACGCAGGTGCCCTTGAGTGAAGCCAACAGACTTGCTCAGGACTATTGCTGGCGCTCCTTACATAGTGCATGCTCCTTCGTCATAGGGCTGTTCAGAAGCTAAGAGCAAGTTACTCACAATCCCTGCAGGCAACAAATGCTATTCAGGACGACTCCAAATATCAGACAACTTGGACTGAAGAAGACTAATAAGAAGGTGTGTGTGataagcagggccagacagaatctgcggacattttttgctatttgtgTGAaggtttaacaaaaaataatctgCAGAATatttttggaagtatcataactaaaaacgtaaaataagaaagatcttaaatcttttatttaatgtttacaatgcaaatccaattagatccacttatttggatGATAAAGCAAGTGTCTCAtacaatatatctactaaaaggcaaaaaatattacatttcaaactgtattgtaaataaatcaaatgaacattttcatgtcaataatattacaaaaaagttatttaaaaactgaataaatttacacacatttacgctagtaaataaatagacttgaTGGGCGTAatatctgcggaaatctgcaagTTTCTGCACACACAGATTCCGTCTGGACCTAGTGATAAGTCTGACAGGAATTGGCGAAATCACTCCctgctatatattttatatctttgTACAGAATCAAATGTTATCAGAATACAGCAGAAAACATGACTAATTAGCCATCATCTGTTGAGCATGTTTTGTTCTCTAAATCGgctatatgtactgtatattcatCTTTCCTGTTGTGTATTTATACGTTAGGATTTCTCAAAGCTGTAAAATCACTTAACATGCTGTCGATGTGTTTACTACATTTTAAAGTGTGTAGATGATACTCAAATGCatacatgttgttgtttttctgagTGTGTgctataaataaatgttcatccTTGA

Function

symbol description
fgfbp2a Predicted to enable growth factor binding activity. Predicted to be involved in cell-cell signaling. Predicted to be located in extracellular region. Is expressed in head; liver; and pharyngeal arch 2. Orthologous to human FGFBP2 (fibroblast growth factor binding protein 2).

GO:

id name namespace
GO:0007267 cell-cell signaling biological_process
GO:0019838 growth factor binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8319 Predicted to enable growth factor binding activity. Predicted to be involved in cell-cell signaling. Predicted to be located in extracellular region. Is expressed in head; liver; and pharyngeal arch 2. Orthologous to human FGFBP2 (fibroblast growth factor binding protein 2).

Ensembl:

ensembl_id ENSDARG00000039964

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00015862 True 1497 mRNA 0.42 2 46449070 46451249

Neighbor

gene id symbol gene type direction distance location
XLOC_008132 fgfbp1b coding downstream 6611 46441617 ~ 46442459 (-)
XLOC_008131 NA coding downstream 11174 46433482 ~ 46437896 (-)
XLOC_008130 bbs7 coding downstream 53411 46375241 ~ 46395659 (-)
XLOC_008129 ccna2 coding downstream 74200 46354648 ~ 46374870 (-)
XLOC_008128 crybb1l1 coding downstream 138521 46301973 ~ 46310549 (-)
XLOC_008134 prom1a coding upstream 4842 46456091 ~ 46617228 (-)
XLOC_008135 NA coding upstream 50630 46501879 ~ 46502192 (-)
XLOC_008136 NA coding upstream 79670 46530919 ~ 46533561 (-)
XLOC_008137 NA coding upstream 178652 46629901 ~ 46675850 (-)
XLOC_008138 ldb2a coding upstream 227462 46678711 ~ 46832825 (-)
XLOC_007641 CU855896.1 misc downstream 44041230 2407736 ~ 2407840 (-)
XLOC_007640 CU855896.2 misc downstream 44041639 2407328 ~ 2407431 (-)
XLOC_007639 CU855896.3 misc downstream 44041998 2406945 ~ 2407072 (-)
XLOC_008121 NA non-coding downstream 331711 46114660 ~ 46117359 (-)
XLOC_008118 NA non-coding downstream 403166 46043869 ~ 46045904 (-)
XLOC_008115 NA non-coding downstream 809264 45630531 ~ 45639806 (-)
XLOC_008109 dre-mir-194b non-coding downstream 980039 45468955 ~ 45469031 (-)
XLOC_008145 CABZ01080059.1 non-coding upstream 1898238 48349487 ~ 48349602 (-)
XLOC_008146 CR376827.1 non-coding upstream 2125335 48576584 ~ 48576700 (-)

Expression


Co-expression Network