CI01000020_00501322_00502978 (LEPB)


Basic Information

Item Value
gene id CI01000020_00501322_00502978
gene name LEPB
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 501190 ~ 503119 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_00501322_00502978.mRNA
CTATAAAGGTCTGTGTATAAACATACAAGCCATTACAGAGGGGGAAAAAATCCTCTAATACACAAAAAAAGCCCAGTTGTCATTTAACCACAACTTTACTGGAAGTGTCCTTACCTGGAGCCCCTGGGTATGATGTCTCAGACCAGAACTTGTGGATGGGGTCTTCTACAGGCTTCACGACTACGGCGGACGACAAGGGCAAACCAGAGCAGACCGGTGCAGGCCCTGGTGGCTGTTAGCATCAGCCGACCCACAGCTACAGAGGACAGGATACGAATCATGGCCCGAACTACCATCAGCCGAATTAAAAAAATCAAGGATGAGCACTTCCAGATGTCTCCAGAGATTGATTTTGGCCCTGACATTGACACACCCATTGATGGTCTCACTTCTATTTACGTTCACTTGAGCTACCTGCAGTTGAGATTGCGAGTGCCTCCAGCCCAGCACCTACAGCAGGTCCAAGTGGACTTGGAAACTCTCCTGAGCACGCTGGAGGGACTGGCCACCTCGCAGGGATGCACCCTGCCCAACCCCGAGACCCCAGTGCACAAAGAAGAAGCAGCCTTCCCCGTTACCTCCAACTACCTGTACCTCCTGGAGCTCCAGAGGTACCTGGAAAAGCTTTGCCTGAACATGGACAAACTAAAATGGTGTAAAGACACAGACGTGGCTGAGATGTTTCTATTCTTTTACACTACGACTTTCTATTTTCTAAGCTATATTTTAATATTTTAGCACATGATGACGTTTTGTAGCACTGAGAAATTTGAACTTGCCTGTAGCTGTTTATTGTATTTTCTATGTTAATTAGACATGAATACAGGAGGATTGTGAAACTGGTAGTATGTTGGGTTTTTTAAAAGAATTTTTAAGACA

Function

symbol description
lepb Predicted to enable hormone activity. Acts upstream of or within response to starvation. Predicted to be located in extracellular region. Is expressed in digestive system; gill; heart; hypophysis; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including alcohol dependence; congenital leptin deficiency; fatty liver disease (multiple); liver disease (multiple); and lung disease (multiple). Orthologous to human LEP (leptin).

NR:

description
leptin B

GO:

id name namespace
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05424 LEP; leptin

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_00501322_00502978.mRNA True 879 mRNA 0.46 3 501190 503119

Neighbor

gene id symbol gene type direction distance location
CI01000020_00466505_00489442 NA coding upstream 11526 466276 ~ 489664 (+)
CI01000020_00250359_00289375 SND1 coding upstream 211815 250359 ~ 289375 (+)
CI01000020_00126243_00220377 SND1 coding upstream 279730 126243 ~ 221460 (+)
CI01000020_00108833_00112799 NA coding upstream 387763 108833 ~ 113427 (+)
CI01000020_00536611_00538626 NA coding downstream 31815 534934 ~ 538982 (+)
CI01000020_00603718_00606833 NA coding downstream 100467 603586 ~ 607523 (+)
CI01000020_00621182_00624570 RAP1B, RAP1A coding downstream 118063 621182 ~ 625201 (+)
CI01000020_00631105_00635541 MCAT coding downstream 127986 631105 ~ 635541 (+)
CI01000020_00643857_00646974 CBLL1 coding downstream 140738 643857 ~ 647559 (+)
G110663 NA non-coding upstream 92026 387647 ~ 409164 (+)
G110645 NA non-coding upstream 143359 357625 ~ 357831 (+)
G110641 NA non-coding upstream 147673 352907 ~ 353517 (+)
G110640 NA non-coding upstream 149065 351896 ~ 352125 (+)
G110634 NA non-coding upstream 154759 346140 ~ 346431 (+)
G110732 NA non-coding downstream 39481 542600 ~ 543136 (+)
G110780 NA non-coding downstream 50070 553189 ~ 553440 (+)
G110783 NA non-coding downstream 52920 556039 ~ 556269 (+)
G110714 NA non-coding downstream 55802 558921 ~ 560207 (+)
CI01000020_00752731_00769950 NA non-coding downstream 251334 752694 ~ 770027 (+)
G110589 NA other upstream 274342 180778 ~ 226848 (+)
G110562 NA other upstream 453150 30693 ~ 48040 (+)
CI01000020_00810993_00815495 CDPF1 other downstream 307780 810899 ~ 816510 (+)
CI01000020_01083614_01106789 PLXNC1 other downstream 564937 1083230 ~ 1107257 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 873250 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 1941125 2443278 ~ 2444944 (+)
G111183 NA other downstream 2144392 2647511 ~ 2658913 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_028729 lepb coding NC_007115.7 CM002888.2 19031768 ~ 19033805 (-)