CI01000020_00603718_00606833


Basic Information

Item Value
gene id CI01000020_00603718_00606833
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 603586 ~ 607523 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_00603718_00606833.mRNA
GTTTAAAAGAAAGTCAACTGAATAAGCTTTGAGTAACTTGGGTACTTGTAGGAAATTCTCATTGATGAAATGGATAGTTAACATCTTTTTTGTCTTGTTTCTTTCTCAGGTAGTTAACGGATACACTGCACAATGCGTGAATACAAGTTAGTAGTCCTTGGATCAGGAGGTGTCGGCAAGTCTGCGCTGCTGTACAGCGTCCCAGGAGAACATCTGTCTCCAATCAGGTCGGTAAAGGTTGTGAGAACTAAACTGGCCTCTGTGAACTTAAATGGCTCACCCATTGGAGAGCAGCCACAATGGCCCGACCCACTCACCTCGGGGCTCAACAAAGAGCCCATTGCCTGTATGTGTGCCACAGGACAGCGGGAAAAAGACAGGTCTGTAAAATCAGATCATTACTATGTGGGGTCAGCCTGGTGTCCTGTAATGGAGCTATATAGACTGCAACAATGGACGCCCGCTTTATAAGACGCCCGCAAATCTGCCAGAAAAACAAATACAGGACTTACCGAAATGAATTAACTACTTGTCCTGTAAAGAATGGTACATTGTGTATTCAAACAAGTCTTTTTAAAGTAATTTTTTCAGGAATCATCACTGTTGTATTGTTTGCGCTGATTCTACATCAAAACAATCTACTGTAGCAACACATTGCTCTATTCATTTGAGTCTGATTTTTTTCGACCAACCATACACATCAACACTGGCTCAACCAATGCTGTGAGTTTGGGGTGGCACTTCCTGTTTGGGCCAACCAATGGCAGATGGGGGAATGTATTGGAAACCTGCTTAAATTCTGTTTGGTGACACCAGTGGCCCATAAATTATATATTTTATGGTCAAAGACATGCTGTGACATGTTCTTTTTTCTATTTTCTTTTGTCTGGATCTATACATTTATTCAGTAATACATAAAAATGCAATTATACATATAATGACTCAAATACATTTTTTTTTTTTCATCAAATACATCATTTTTTCCACTCATTTTGATTTTTTGATTTTTTTTTTTTTTACAAAATTATGGAAGTATAAATATAGATATATGAACAACGTTTTGTGAAATGTTTGATTTAAAAAAAAATATATTCATTTTTTCAAAACTACACTATCATTCAAAAGCTTTTTTATGTTTTTGAAGAAAGTCAGCAACATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_00603718_00606833.mRNA True 1161 mRNA 0.37 4 603586 607523

Neighbor

gene id symbol gene type direction distance location
CI01000020_00536611_00538626 NA coding upstream 64604 534934 ~ 538982 (+)
CI01000020_00501322_00502978 LEPB coding upstream 100467 501190 ~ 503119 (+)
CI01000020_00466505_00489442 NA coding upstream 113922 466276 ~ 489664 (+)
CI01000020_00250359_00289375 SND1 coding upstream 314211 250359 ~ 289375 (+)
CI01000020_00126243_00220377 SND1 coding upstream 382126 126243 ~ 221460 (+)
CI01000020_00621182_00624570 RAP1B, RAP1A coding downstream 13659 621182 ~ 625201 (+)
CI01000020_00631105_00635541 MCAT coding downstream 23582 631105 ~ 635541 (+)
CI01000020_00643857_00646974 CBLL1 coding downstream 36334 643857 ~ 647559 (+)
CI01000020_00701439_00712656 DEF6C coding downstream 93916 701439 ~ 712825 (+)
CI01000020_00715984_00729331 ATXN10 coding downstream 108461 715984 ~ 729961 (+)
G110714 NA non-coding upstream 43379 558921 ~ 560207 (+)
G110783 NA non-coding upstream 47317 556039 ~ 556269 (+)
G110780 NA non-coding upstream 50146 553189 ~ 553440 (+)
G110732 NA non-coding upstream 60450 542600 ~ 543136 (+)
G110727 NA non-coding upstream 62508 453183 ~ 541078 (+)
CI01000020_00752731_00769950 NA non-coding downstream 146930 752694 ~ 770027 (+)
G110741 NA non-coding downstream 280605 888128 ~ 888384 (+)
G110808 NA non-coding downstream 285419 892942 ~ 893173 (+)
G110822 NA non-coding downstream 361870 969393 ~ 970349 (+)
G110742 NA non-coding downstream 367348 974871 ~ 975583 (+)
G110589 NA other upstream 376738 180778 ~ 226848 (+)
G110562 NA other upstream 555546 30693 ~ 48040 (+)
CI01000020_00810993_00815495 CDPF1 other downstream 203376 810899 ~ 816510 (+)
CI01000020_01083614_01106789 PLXNC1 other downstream 460533 1083230 ~ 1107257 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 768846 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 1836721 2443278 ~ 2444944 (+)
G111183 NA other downstream 2039988 2647511 ~ 2658913 (+)

Expression


Co-expression Network