CI01000020_00771062_00774260


Basic Information

Item Value
gene id CI01000020_00771062_00774260
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 770959 ~ 774524 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_00771062_00774260.mRNA
ACATTTTTTCAAAATAGCTTTTTATAGGGAAGTTACAGTACTTCCATGTGAAGAAACATAAGCAACAATATCTCAGAAAGTAGAAAATAATTGTGTGTCCACGAGGAAAAAAAGTTCAAAAGCTCAATAATTCCAAATGAAATCAGTAAGGATTAACGTCAATGTTTCGGATCCATCGGGATACGACTGCATAATTTCGCAAGGGTGGGGCAGCTGTGCTACAGTAAAGGTCTGAAATCACAAAATGGAGGACAGTTAGACAACATGGCGGTCACCTCTGATAAGAGCATGCGCCTATGTCCACGCAAGCAGGATGAGGCTGTCTGCATAAGTCCTAAACTGTTCCTCGATGTAAACAGATTAACAGATAAATTCAGTACAGCCTGCTTTTGCATGTGCCACGTCACTTCGTCTCCGAATGGACGAGACCTCCAGGATTTGCCCCAGCTGAGCCTTCTACACCCAGTCAACCCTCTTCCCCCACAACCGACAATGACCGGAGCGAGGGATGTGCCGGACGCAACCCCAGCGGAGCACTTTGATGGATATCGCACCCTCTGAAAGATGAAATTCTTTACATCATTTTTAAATTTTTGTTATTTCCTCTCTACATTAAAGACATAAGAGAGGTATGGTTTTAATGATAGCAAGACCATGAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_00771062_00774260.mRNA True 664 mRNA 0.42 3 770959 774524

Neighbor

gene id symbol gene type direction distance location
CI01000020_00734012_00742045 WNT7BA, WNT7BB, WNT7B coding downstream 28914 733617 ~ 742045 (-)
CI01000020_00686072_00697099 SLC26A4 coding downstream 73470 685836 ~ 697489 (-)
CI01000020_00668211_00680679 SLC26A3.2 coding downstream 90199 667869 ~ 680760 (-)
CI01000020_00648652_00656756 SLC26A3.1 coding downstream 114192 648259 ~ 657256 (-)
CI01000020_00635947_00637797 NA coding downstream 132653 635637 ~ 638306 (-)
CI01000020_00901339_00902642 NA coding upstream 126703 901227 ~ 902642 (-)
CI01000020_00903124_00916916 NA coding upstream 128582 903106 ~ 916916 (-)
CI01000020_00919569_00931298 CFAP54 coding upstream 145045 919569 ~ 931298 (-)
CI01000020_00936240_00942015 NCAPH2 coding upstream 161286 935810 ~ 942015 (-)
CI01000020_00996310_01006955 PLXNC1 coding upstream 221786 996310 ~ 1006955 (-)
G111699 NA non-coding downstream 13238 756298 ~ 757721 (-)
G111657 NA non-coding downstream 40977 729147 ~ 729982 (-)
G111645 NA non-coding downstream 109733 660982 ~ 661226 (-)
G111643 NA non-coding downstream 110536 660199 ~ 660423 (-)
G111641 NA non-coding downstream 112921 657811 ~ 658038 (-)
G111720 NA non-coding upstream 14415 788939 ~ 789461 (-)
G111674 NA non-coding upstream 39586 814110 ~ 887919 (-)
G111762 NA non-coding upstream 113604 888128 ~ 888422 (-)
G111694 NA non-coding upstream 114468 888992 ~ 892782 (-)
G111670 NA non-coding upstream 123681 898205 ~ 900349 (-)
G111638 NA other downstream 123430 645989 ~ 647529 (-)
G111625 NA other downstream 183892 584212 ~ 587067 (-)
G111351 NA other downstream 663975 97024 ~ 102468 (-)
G111774 NA other upstream 199084 973608 ~ 974641 (-)
CI01000020_01463785_01480876 GNPTAB other upstream 705620 1463771 ~ 1481058 (-)
G112136 NA other upstream 1343839 2040034 ~ 2121232 (-)
CI01000020_02121873_02122329 KISS2 other upstream 1347224 2121714 ~ 2122619 (-)

Expression


Co-expression Network