CI01000020_00903124_00916916



Basic Information


Item Value
gene id CI01000020_00903124_00916916
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 903106 ~ 916916 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000020_00903124_00916916.mRNA
AGTCTCATGGATGTGAGCTCACTGGACAGGAAGACACTGTTGTACTCTACATGGTGATTGAAAACAGCCCCCTCCAGCATGCCTTTAAAGAGGTGATGAAGTTGAAGCAGAAGTCTTGTTTTCTGGAGTTTGTTGTGCACTTGCTCCAGAAAGCCCTGCTAGAAGATGAGCTAGATCTGGTGTTGCGGTGGGAGCAGAACATTTTGAACTGGCTCAGCAGACGTGACGAGGCTTTGTACGGGCTAAAGAAGCACTCGGGTCTACCAGGAGAGGAGCTGAAAGATTTCACAACCTCTGTGATAGAGTACAACACCGAGAAAAAAAAAGGTGGCACCTTTTGGGGTGACAGGAAGTTGCTACAGAAAAGGCTACTGATTGCATTCAAGAGCCAGAACTCTGAAAGAGAGGTCAGAGCTGTGGACATCCTGCTAAATCAACTGGCCGCTCTTATCAGAAGACACCAGCGCCTCTGGAAGCTGAGGCAGATGCGCTCTGAGGATTCACTGTGGCGTTGCCATGTCAATCTGAACCTGGCTCGTGCCCACCTAGGCATACTGAGGAGGAACCTGGGACCACCTCCCCAGCTCTGTTTTAATCACCTATCGCAGTCTTTCTTCTCTCTCGCTCACTGTGGAATGCTGATTATGTGGAAGAACATTCCACAGCAAATCAGGCCACCTGAATTGACTCTTCCACGTCCCAAATCTGTACCCCGTCCTGGACGGCGTGCTCATAAAATAAAAGTAAAACACAAAGTTAAACACACTAATCAAGGAGCATCAAACACCAGTGATGAGGAGTTGAACTCTGCAGACAGTGAAGTGGAAGGTGAAGTGGACTCTACGTTTCGGCACACCCACAGCCCTAAAGCTGACGACGCTCCTGCTGATCAAAACACCTTTCAGTTACTGGACACACTTGACAAAGCCTCTATATATATGCGCAGAGCTATGGTGCTAGCACATCGCTGGAGTCACTGGACAACTTTACAGTGGGCATGTCGGATTCTGTGGGACCAAATCAGCACACTGGCCCTGATGATAGAGCGAGCCCAAGGCCCTGATACCCCTGCCAGACAGCTGACGATAGAGCAGCTGTATACAGTGATCACTCCTCTACTGGTGCTTGCCTCAGATCTTCTCATGGACATGATGGAGAAGCTTAAGGCCAAGTGGGAGAGTCTTGTCCATCTGGCCATACTTTTCAACACATACACTAGGTACGCTTATAACTCACTGATGCTGGTGGCATTGGTTTGTATACTTGATAAAAAATTATACAAGGAGCGCTACTCACACATGGTAACACCTGTACTGGTGCATGCACAGAGAAGGCTGTTGGACAGGATCAGCTGTTTCGGTGGCCCTCCAGCCCCTCAACCTCACTTCACCTTCACTGAGATGATCTCTGGAGAGAAGGTGACCTGCAGGAATTATGCAAGCAGACAGTTGCTGTTTCCCTGTGGAGAAGGTCAGATTATGATTACTGCAAATGATACTAACCCAGAGCCCAAGGAACTTGCAGATGTGAAGAGAGCCATGTGTCTGGTGTGTGTACCGTTGGATGTGGAGGATACACTGCAGTGTTTCAGAGAGACTCTGGAGAGAAGACATCACGCACTGCTGACCTTTCAGCACAGCCGAACTCTACTCCTGCTGCTTCTGGCTGACACACAGCACTCATATGTTGAGGTGCCATTCTCTAAAGAGACCAGCGGCGTTCTGGAGGAGAAAGTGAAATTCAACATGGCAGCCAGCGTCCTGCCAGGTGTCAGCCCTCCAGACCTGTCCACAGAAGACTTCAGCTCTCTGGGCTCCATCTACAGCACCACCCTGCCTCCATCACAGCTCCAGACTGTTTTCTCCTCCTACAACAACTCAATTAAATATCTTCAAGCAAATAAGTACAACTCCCTCCAGGTACAAGCACTCCATGACCTTGGAAACCTGCATTTCTACAATGGAAATCGAAAATCTGCACACTATTTCTGGAGTAAGGCTCTGGACTGTGTTCTGCAAAGCTCTGGAGTTCTGGAATCTTGGGATGGTGACTCATGGGGCTGCAGCTCCTCTCAGGAAACCCTGCAGCATGCTGGGATATGGGGTTGTCTCCAGGGAGCTTTGCTTTCCGCCAAGATTGCACAGCACATCCTGACTTCTAACATCAATCAGCGCACAAAATGCTGCCTTCTCTCTGCCAAACTCTTCAAGTGCCTACTAATGGCCTCTATGCCCCATCCGATGACGGACCTGTCATACTCCACATACTATTTGGAGATGGATCTGATCCCAGGCATCGACCTCTTTTCTGAGCCGGATCGAGGGAATCTCGGCACCACTGTTGCCTGTTTGTCTTTCCTCTGCCACTGGCTGTATACCTCAGGACACCTTCTCAAGATAAAGGTATTGACAGAATTAGGGGCCTTCACTCAAGCGGTTAAAGAACTCAGTAGTCTCACATTTGGTGAGGGAATCCCTGTGCCTCATGGATGTCACCACAGAGTGGAGAAGCCATCTTGGGCTCTAGAAGAAGTGGTCAATAGGAGGCCAAGTAAAGACATCATGGCTCTTTATGGCTCAAGATTGACCAGGTGGATCCTAACGGCCAGAGTTCATCTCATCTTGGCTATATGTAGTACTATACAAGACCTGCCTGAGCCACCACCAACAGAGTTATCCGAATCTCAAGAGAAAAGCTCAAGCACTCCCTGTTTGCCTGATGGCTCCAGCAGTGACGAGTCCAAGGGTCTCCAGCTCAGTGCCAGGAAACTCACATTAGGAGAAGTCAAGGCCATAATCCTAAAAGAAGCACATGCTCTGGTTAGTCCTGAGGTCTCCACCTCACATCCGCTGAGCATCGATCCTGAAGAAATGGAGCTGGCAGTGGAGATCAGACTGTTAATGTCCAATATCAACATGCAGCAGGGCAGAATGGCTGCCAGTGATTTCCGCCCGCTGCCTCCTCCTAAACCACCCTCCTCTGCACTCAGACGATCCAGAGCCAAAACATATCAGTCAAGCTCCCGGGATGCAAAGTCTGTTCTTGATCTCCATACTGGAGATCTTCCAGAAGAGGTGGAAGCGAGAGAACGCATGGATCTCCTTTTCTGGCTGCGCTGTAGGCTGGCAGTGGTTCGCTCTCTCGTAGGCCATATCCCTGGAGCTGCAATCTACTCTGGTGCAGACAGTAGTGCAGAGGCGCTCCGGCTGCTGAAGGAGGGTCTGGCGGAGGCTGAGGCCTGGGGAGACCCTGACACTAAAGCCCTCCTGCTCCTACAAGGCGTCCAACTCAACACAAACTGTGGCAGACCCAGAGAAGACAGTACAGCCATGCTACAGCTCTGTGCTACTGGAGAGTCTATAGGTCTCAAAAAAGGAGGCGAGGTGGAACTACGAGTGGGCCTAAAGAATATTTATCTTCCACAGCTCGTTCTGCTGGCCAAGACAACCATGCGGATTGGTCGCTCTTTGGCATTGGAGGCCTTGTCAGGCTCCTCTGAGGGAGGTGAGGAGCCCTGGAGGCCCTTAATATTTGCTCAAGAAGTACTGCAGTCTGCACTCAGCATCTCTCAGGCCTCTGCCAACAGAGACCGCCAGCTGGAGGCTGATATCCTCTACTACACAGGAGTGGTGGGAAGACATCTCATTTCCATGCAAAAATCTGGTCACCAGGAAGTCCTAGAGGCTCTGTTTGGGTGTTTAACCACATTTAAGCACACTCATAGCCAAAGCTTACGATTGGCACATAGGTGCTACCTGGAAATGGCATTGATATACTTACAAGAGATCGAGCAGATTACCCCTCCCCCTGGACATGTGACTCCTCCCCCATCACCAACACCTGACGAGACCAGCAAGATCTCAGAAGTTATTGGCAAATATGGCCTTTTGCATGGATTCACTGGAGTAACTGAAGGCCCCATCCCTCTTTCTTCAATAAAAGCCCTGCCTGACTTTGCATTGAATGATCTCTTCCACCCCTGTGGGGGGCTAGAAAACCCTGATAATTGTACTGCCAGTCCTGAAGCATTCATGGACGCTGAGCATGAGATAAACAGCAGGAAATGCCCTCAGCTGACCTGGGTTCATATGTCCCGCTACTACATGCACTTAATCAACCTTCTACAGGTCTCCTCACAGCCAGGTGCAATGCAGGGTTTTGACACGTCCGGTGACACAAAACTTGCTCTCAGACTCTCACAGTTGCACACCTTCTTCAGCTGTCACCAGCCGTCTTACAGGGAGAAGTGGACCATTCCTGATCCCCCTGCAGCTCCAGTACTAAATCCTCAGCAAATACAGGTTCATATTCACTCATTTATTTCCATCTTAAAATGAAAAGAGAAAAAAAATAAA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000020_00903124_00916916.mRNA True 4355 mRNA 0.50 31 903106 916916

Neighbor


gene id symbol gene type direction distance location
CI01000020_00901339_00902642 NA coding downstream 464 901227 ~ 902642 (-)
CI01000020_00771062_00774260 NA coding downstream 128582 770959 ~ 774524 (-)
CI01000020_00734012_00742045 WNT7BA, WNT7BB, WNT7B coding downstream 161061 733617 ~ 742045 (-)
CI01000020_00686072_00697099 SLC26A4 coding downstream 205617 685836 ~ 697489 (-)
CI01000020_00668211_00680679 SLC26A3.2 coding downstream 222346 667869 ~ 680760 (-)
CI01000020_00919569_00931298 CFAP54 coding upstream 2653 919569 ~ 931298 (-)
CI01000020_00936240_00942015 NCAPH2 coding upstream 18894 935810 ~ 942015 (-)
CI01000020_00996310_01006955 PLXNC1 coding upstream 79394 996310 ~ 1006955 (-)
CI01000020_01011931_01030587 NA coding upstream 95015 1011931 ~ 1031474 (-)
CI01000020_01033833_01045061 NA coding upstream 116917 1033833 ~ 1045734 (-)
G111670 NA non-coding downstream 2757 898205 ~ 900349 (-)
G111694 NA non-coding downstream 10324 888992 ~ 892782 (-)
G111762 NA non-coding downstream 14684 888128 ~ 888422 (-)
G111674 NA non-coding downstream 15187 814110 ~ 887919 (-)
G111720 NA non-coding downstream 113645 788939 ~ 789461 (-)
G111769 NA non-coding upstream 39503 956419 ~ 956733 (-)
G111773 NA non-coding upstream 58136 975052 ~ 975584 (-)
G111775 NA non-coding upstream 58813 975729 ~ 976452 (-)
G111781 NA non-coding upstream 66402 983318 ~ 983567 (-)
G111782 NA non-coding upstream 68621 985537 ~ 985870 (-)
CI01000020_00648652_00656756 SLC26A3.1 other downstream 245850 648259 ~ 657256 (-)
G111638 NA other downstream 255577 645989 ~ 647529 (-)
G111625 NA other downstream 316039 584212 ~ 587067 (-)
G111351 NA other downstream 796122 97024 ~ 102468 (-)
G111774 NA other upstream 56692 973608 ~ 974641 (-)
CI01000020_01463785_01480876 GNPTAB other upstream 563228 1463771 ~ 1481058 (-)
G112136 NA other upstream 1201447 2040034 ~ 2121232 (-)
CI01000020_02121873_02122329 KISS2 other upstream 1204832 2121714 ~ 2122619 (-)
CI01000020_02828968_02849511 NA other upstream 1927384 2828763 ~ 2849518 (-)

Expression



Co-expression Network