CI01000020_00934438_00935330


Basic Information

Item Value
gene id CI01000020_00934438_00935330
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 934438 ~ 935356 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_00934438_00935330.mRNA
TTGTTCTGAGGATGTTGAGAATCGGCTGCCTCAGAGGACTCAAATGGCATGTGACGTCATGGAGCATCCTGGGGTCAACAACGAGAGAAACAACTAACCTTTCACATCATATTTCACACCAGTCCCACTTTAGAACATCAGCTCGATGTTTTCCTCCACCACACTACCGTCTACCACCTTTATTTGGAGAACATAGAGCTTTTTACTCTCAAGGCTCCTCTAAAACTCCAAACTCGGGCTCGTCGGCAAGGATCAAACTACGTACACGTTTGGTGGTGGCGCTGCTTTTCGGAGGTGGTATTATTGGTACCTGGTGGTATGTGTACCGGGAGAAACAACAGAGGATCCAGATGCAAAGACTGGAACAGTTGAGGAAAGTGGCTGTCGGACAGGGAGACTTCCATCTGTTGGATCACACAGGACAGCGCAGGACCAAACGTGACTTCCTGGGCAATTGGGTGCTCTTGTACTTTGGCTTCACCCACTGCCCGGATATCTGCCCCGACGAGCTGGATAAAATGACCAACGTGGTTCGTATTCTGGATAAAGACCCTAGCCTACCCCCTGTCCAGCCACTTTTTATCACCGTTGACCCTGAGAGAGATGATGTGGCCGCTATGGCCAAGTACGTGAAAGATTTCCATCCACGGCTGGTTGGATTGACAGGTACTGCGGAAGAAGTGAAGCAGGCAGGACGGGATTATAGGGTTTATGCCAGCGCTGGTCCTAAAGATGAGGATGGGGATTATATTGTGGACCACACCATCATCATCTACCTGGTTAACCCAGACGGACTCTTCCTGGACTACTACAATAGAATGAAAAATGATGTCCAGATTGCTGAGAGTATACGTAATCACATGAAAAATTATGTTAAATTATTTCCAGATTAATCTGAGGGGAAATACGTGTTTGCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_00934438_00935330.mRNA True 919 mRNA 0.48 1 934438 935356

Neighbor

gene id symbol gene type direction distance location
CI01000020_00892454_00900973 RINT1 coding upstream 33387 892454 ~ 901051 (+)
CI01000020_00819154_00820506 NA coding upstream 113165 818849 ~ 821273 (+)
CI01000020_00810993_00815495 CDPF1 coding upstream 118730 810899 ~ 816510 (+)
CI01000020_00798124_00809552 PPARAA coding upstream 124381 797612 ~ 810057 (+)
CI01000020_00752731_00769950 NA coding upstream 164411 752694 ~ 770027 (+)
CI01000020_00949140_00951237 SOCS2 coding downstream 13400 948756 ~ 952785 (+)
CI01000020_00959078_00971223 CRADD coding downstream 23722 959078 ~ 971999 (+)
CI01000020_01083614_01106789 PLXNC1 coding downstream 147874 1083230 ~ 1107257 (+)
CI01000020_01120223_01142481 UHRF1BP1L coding downstream 184867 1120223 ~ 1142573 (+)
CI01000020_01147997_01150696 NA coding downstream 212189 1147545 ~ 1150963 (+)
G110808 NA non-coding upstream 41265 892942 ~ 893173 (+)
G110741 NA non-coding upstream 46054 888128 ~ 888384 (+)
G110714 NA non-coding upstream 374231 558921 ~ 560207 (+)
G110783 NA non-coding upstream 378169 556039 ~ 556269 (+)
G110822 NA non-coding downstream 34037 969393 ~ 970349 (+)
G110742 NA non-coding downstream 39515 974871 ~ 975583 (+)
G110738 NA non-coding downstream 40313 975669 ~ 976633 (+)
G110836 NA non-coding downstream 92088 1027444 ~ 1066165 (+)
G110743 NA non-coding downstream 122085 1057441 ~ 1068884 (+)
G110589 NA other upstream 707590 180778 ~ 226848 (+)
G110562 NA other upstream 886398 30693 ~ 48040 (+)
CI01000020_01375811_01378288 AVPR2L other downstream 441013 1373164 ~ 1379068 (+)
CI01000020_02444149_02444833 NA other downstream 1508888 2443278 ~ 2444944 (+)
G111183 NA other downstream 1712155 2647511 ~ 2658913 (+)
G112679 NA other downstream 2365815 3301171 ~ 3303730 (+)

Expression


Co-expression Network