CI01000020_01120223_01142481 (UHRF1BP1L)


Basic Information

Item Value
gene id CI01000020_01120223_01142481
gene name UHRF1BP1L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 1120223 ~ 1142573 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_01120223_01142481.mRNA
GTTTGCTAAGAACCTCTCCCCAGATAAGATTAATCTGAGCACTCTGAAAGGGGAGGGCCAGCTTACCAACCTGGAGCTGGATGAGGAGGTTTTGCAGAACATGTTGGATCTGCCCACCTGGCTCGCCATTAATAAAGTCTTCTGCAACAAGGCCGCCATCCGGATCCCATGGACCAAGCTGAAGACTCATCCAATCACTCTGTCCTTGGATAAAGTTGTCATGGAGATGAGCACCTGTGACGAGCCTCGCCCTCCCAACGGTCCATCACCCATTGCAACAGCCTCGGGTCAAAGTGAATATGGTTTTGCGGAGAAAGTGGTGGAGGGCATCTCACTCTCTGTGAACTCCATAGTGATCCGTATCAGCGCCAAAGCCTTTAATGCCTCCTTCGAGCTCTCGCAGCTCCAGGTCTACAGCGTCAACACCAGCTGGACCACTGGTGACCTGCGATACACACGCATCCTGGACCCCACACGTGGAGAGATCCTAACGTTTAAGGAAGTGAGCTGGCAGATGATCAGGATTGAAGCAGATGCCATCCAGAACACAGAACATGAGGTCCTCAGAGCACCCATACGCCTCATCACCAACCAATCAAGGATCAGAGTCACTTTAAAGAGGAGGATGAAAGACTGTAATGTTGTTGCATCAAAGCTGATTCTAATCCTGGATGACCTGCTGTGGGTGCTGACAGACTCCCAGCTCAAGGCCATGGTGCAGTATGCGAAGTCTCTCAGTGAAGCCATGGAGAAATCAGCTGCGCAGAGGAAGACTATGGCCCCCGACACCACACAGGTAACAACGGCACCCCCCTCAGCCCAGCAGGTGCGCACACAGCAGGCTTCAGCCACAGCAGATCAGAATGCTTCCATGGAACGGCTGTTTAACTCCTATGATGTTCGTGAGACCTCACACCACCTCCAAATCACACACTTGGACCTGCATATTTGTGACGACACCAATGCCAAGGACAGAGGAATTAATAAGAGATTAGATGGTGGCGCAATGCAGTTGTCCTTCAGTTCTATCACTGTAGACTATTACCCCTTCCACAAAGCTGGTGAGGGCTGTTTGCATTGGATGCATTACAGTGAGGCCACAAAGTCTCGTGAGACCTGGGCCCGTTCTCTCCTGGAGGAGTTTAAGTCTAATGTGGATATGTTAAAAAACGTAGTCAGTGGCCAGTCGCAGAACTCCCCTCAGCATGTCCGTCAGTCGATTGTCTTAGAGGCGCAGGGTGAAGGGATAATGGTTAGGGAGCTGGACTCAGGCCCAGATGGTTTGTGGCCGCTCTCCCCTACGGCCAACTGCTGCTGGTGTCTGGAGACAGGAAAGATCTCCACCAGCTCCAGCACTTCCTTCTCGCCTCCATCTGCACCGAGAACCCAACTCATGTCCAGCTCAATTGTGCTACGGATGGCAGATTTCAGCATCTATCAGGTGTCTACAGCAGACCAGCCACGATCCAGTCCTCAAAGCATGATATCCTGCAATAAGAAAACCCTCTATCTCCCCCAAGAGATGCCGGCCATCCATGCCGAATTCACAGAGTACTACTTCCCAGATGGCAAAGACTATCCCATCCCTTGTCCCAACCTGTACGTGCAGTTGAACGCGCTACAGCTGGTGCTTGACTCGCGCAGTCTGGTTTGGCTCAATCTGTTTGCACTAGACCTTCGTCAGAGCTTAGAACAATTTATGGAGCTGTACAAACTCAATGACTCTCAGAAACCTGACGAACATGTAGATATCAGAGTGGACGGACTCATGCTGAAGCTGGTGGTCCCTGCAGACCAGGAGAAGGGTCAGCCTGGCCAGCCTCGCTCTCTGTCAGTGCAGACCTCTGAGATGGTAGCCACTAACACACGTCACTCTTCTGGATGCACTCGGTCCAGTCTGGAATCCCTTTTGCAGGCCTTCCAGGAGCAACCCTTCTTCACCTCCCTCTCTTCCTCCTTTCCTCATGCCCAAAACTCCTTCTCTGTGCTGCATTCAGCCTTCCAACGGCATGCTCATGAGCAGGATACGCGTGTTCATGATGTGTACCGGGGCCTCGCTCCACCATCTCTCTCCACCAGTGCCCTCAAAACACCAGCAGCCACTGACTTGTGGGCTCTGCACTTCTCTCAGTTCTGGGTGGACTATGAGGGCTCACGCAGTGGGCGAGGTCGTCCGACACCTTGCGTGGACTCTTTCCCTCTGACTCTTTGGGTATGCCACCCTGCCCGATACACCCTGCACCACGAGAGGCTCAGAGCAGGCGTAGGGTCAGGCCTGTTGCCTCGCAGTGAGTCAGCAGAGATTGCCAACCGTCTGCAGAGGAAAAAGCTTCTTAAGGAGTACTACAGCACTGATGCATGTCTAAGCAACATGCCAAGCAATGGTCTCCACAAACCACAGTCTCTAGATGGCCTATTTAGCGACTCCTCTTCGTCTCTTTCCCTTGCTTCCTCGTCCTCTTCCAATGAAGTAGACTTGCAGGTGCTAGTGCACGTTCAGAAGCACCTGAGTGCTCAGGTGAGCCATGGGCAGTATATGTTCCTGCTCAGACTGCAACATGCTGTGAAATCTCTGCAGCGCACTTTACAGCAAGATCTGGAGCAGTATGGCTCCAAGCTCCAGGGTCCCACACAACCCTTCAGCGTCTGCGTGGGCATGCTCATGAAAAGTGCAGAAGTTGCACTACTTTTAAAGCCTATTCCCCAACCGGATTTAAGCACCAGCCCCCTGGACTCTGATGTCTCCCCCTCAGAAAGCAGGACCACTCTTGAAGCTGGGAGTGAGGTGGGCGAGGAACACGAGAGACCCTCCGCTGCAGGAGAGGCTACTCCAAACGCAGATCAGCTCCTCTTTGCAGATACGCATGGGCTCAACGTGTCTCCTCTCCTTCCATCCACATCCCCATCTCCTGCTCTGAGAAAGGCTTCTATGGATGAGATGAGTAGCGTGGCATCTGGAGGGAAGGTGCCGTCTGAGGAGAAGAAGGAATTGATTGAAGGATCTTTTGATGGAGAGGGCAGCAGAACTGAAACCAAAGGGCAACAGAGTGAAACCTCACAAGGTGGAACTGCGGGAGTCTCTGACACTTCTTCCAGGGAGTGGAACGACAAGAGTCAGGGAGGCAGGCTGCCTCAGTCCATGTCCAGTGGTCGTTTGATGCAGGGCAAGTCACAGTCAAGTTTCTCAGTGTCCTTTAAGAACATGAAGAAAAGCCCTTCACTACAGTCTCTGGATGATCTCTCCATAGACAGCTACTCACTAGAGGACTGTGACAGCTACAGCCTGCTGGAGAGAGATGACGTATCAATCTCTGGCTTTAAAGAGGTTCTAAATGAGCAGATTTCCACAGAAGGGGCTAATGTGAGTCTCGCGCAGGAGGCAGATGAGACCCAGTCACCTGACGCCATGAGCGCTGCCTCACAGAGCATAGACGAACCCACAAAAGACCTTGTAATTTCCTCTCTCCTTTCATTCCTCTTTTCCCAAGTTAACTTTTTTGTTATCCTGAATGAAAATAATGAGATTGTGTCGGTATTGGTTTTGAAGGTTCACTCGGTCTGCTGTTCTCTGGATCTGAAGGGTGATGATACAGCAGTAGCTCTGGAGGTGGGGCGGATCCGACCAAATCAGCTCGGCAACGTCAGTTTGCGTCAGTATCTTAGCAACCGCAGCCTGGGTTTAGTGTCTTCAGCATCAGTCGCTCAGAGTGGTGAAGGCTCTGGGTCAGGGTCGGACCCAAGCACGGTGTTATTAAATCCAGAGGTGCAGGTGAGGCTGGAAAGCGGCCCGGGGGCAGCGGTTCACTCTCCTCTCGCCGAACAGAACGGCTTCCTGCAGTGCCGCCTACAGGCCTTCAGTGCCGACTTCCTCATGACATCACTGCGAAACCTCGCCCTCTTCCTGGGGGATGACACCGCCTCCCAGGTTCTTCCCATGGAGATCACAATCAAAGATACACACGTGAACCTCAAGGATGATGTTCCCCGTGACAAAGCGTCAGAGCCTGAGGCCACGCCCATCGCCGTACATATTCATAATCTGCTTATCCATCGTCAAGACGACGGCTCATTCAGCATTGGAGGAGCTGAGCGTGCCGTGGACCCAAAGCTTCAGAAGGCGGGGCCTGTGAATGACAGCAGGCTCAGTTCTGTCCCTGAAGTTCCTGTAGGTGTGGCCAGTGAGCCGAAAGCCACTCAGACTGCACCTCTGTCACCCACAAGCCCCACCCCCTCAAGTAGAGAAAAGCTGCTCGTGGAGGAGAATGAATGCTTGAAATTGGAGCTGTCCAAAGCCAAGATGGCGCTAGCGGAAGCCCAGATGGAGAAAGACTCTCTCCAGCATCAAATGAAGAGTCTCAAACTCACCAGCGGGGGCAGCAACAGCTACCGAGAGGAGAATGGTATGTGTGCTGTGACGGAGCTCTCACCTCACACGGGAACCAGACTTTATCTGCTCTTAAAGAACAGTGTTCTTTACTATAGTGTACACACAAAGCTTCAGAATCAGAAAAAGTCAATGACCTCTACAAGTGCCTGTGACTGCACACCTTCTCCAGAGGTTCTGCTTGATTTTTTTCTCATGTCTTGTTCTCTAAATGAATGTTTTGATGCTCTTCACAACGTAAGCTTTTATCTGGAGAACATTTTTCAGATGTTGGGACTTGAACATGGAGAGCTGGATGACGAACATCTGATTGTAGGAAACAAAATCTTTTCTTCTGTAGTTCTAGGCCTCACCCCTATGACACTAGCCCCGCCCCAGTATGTAATAGACACGCCCCTTAGAGATGGAGGCCCGCCTCTTTAGCACAAATGATGAATGATGCTCTATCAAGCAAACTTATAAAATGATTATTTCTTATGTCTGACAGAAGCTGCTGAAGTACTGAGACAACTGAA

Function

symbol description
uhrf1bp1l Orthologous to human UHRF1BP1L (UHRF1 binding protein 1 like).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_01120223_01142481.mRNA True 4899 mRNA 0.52 24 1120223 1142573

Neighbor

gene id symbol gene type direction distance location
CI01000020_01083614_01106789 PLXNC1 coding upstream 12966 1083230 ~ 1107257 (+)
CI01000020_00959078_00971223 CRADD coding upstream 148224 959078 ~ 971999 (+)
CI01000020_00949140_00951237 SOCS2 coding upstream 167438 948756 ~ 952785 (+)
CI01000020_00934438_00935330 NA coding upstream 184867 934438 ~ 935356 (+)
CI01000020_00892454_00900973 RINT1 coding upstream 219172 892454 ~ 901051 (+)
CI01000020_01147997_01150696 NA coding downstream 4972 1147545 ~ 1150963 (+)
CI01000020_01187688_01253805 NA coding downstream 45006 1187579 ~ 1254010 (+)
CI01000020_01275836_01316392 ANKS1B coding downstream 133263 1275836 ~ 1316392 (+)
CI01000020_01341579_01343530 NA coding downstream 198320 1340893 ~ 1344046 (+)
CI01000020_01375811_01378288 AVPR2L coding downstream 230591 1373164 ~ 1379068 (+)
G110743 NA non-coding upstream 51339 1057441 ~ 1068884 (+)
G110836 NA non-coding upstream 54058 1027444 ~ 1066165 (+)
G110738 NA non-coding upstream 143590 975669 ~ 976633 (+)
G110742 NA non-coding upstream 144640 974871 ~ 975583 (+)
G110822 NA non-coding upstream 149874 969393 ~ 970349 (+)
G110891 NA non-coding downstream 237105 1379678 ~ 1379912 (+)
G110892 NA non-coding downstream 237639 1380212 ~ 1380452 (+)
G110908 NA non-coding downstream 244765 1387338 ~ 1387541 (+)
G110909 NA non-coding downstream 245036 1387609 ~ 1387903 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 303713 810899 ~ 816510 (+)
G110589 NA other upstream 893375 180778 ~ 226848 (+)
G110562 NA other upstream 1072183 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 1301671 2443278 ~ 2444944 (+)
G111183 NA other downstream 1504938 2647511 ~ 2658913 (+)
G112679 NA other downstream 2158598 3301171 ~ 3303730 (+)
G112753 NA other downstream 2571808 3714381 ~ 3733586 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location