CI01000020_01147997_01150696


Basic Information

Item Value
gene id CI01000020_01147997_01150696
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 1147545 ~ 1150963 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_01147997_01150696.mRNA
CCATATAGGAACCGAAAGAAAGAAACACTGATGCTGGGCCGCCCTGCTGTCGGTACAACGGCGCGCGCGCACACACATAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCGCGCGCGCGAGGAGAACAGCGTGTGTACGGTGACCGAGAGCGCACGGACAGAGCTGCTTGTGAGTGTGATTTAACCCGCGTCTCCAGGCAACCGGCCCGTCTGGAGGACCATCATCCTCCCGTTAAGCTCAGCTGCACCGGGACCGCGTTATACAGTAAATATCCGGAGCATCATTCCATCATTGAGCTCCGGTATGGACTAACGGCTTTATTCATACAGCAGCGCACGGCGGAGCGTCTGTTTGTCGGTAACATGCTGCAGAAATACTAATAGGAAACCTCGCCGTTCAGTCCGGATTGTTTTTGTTCTCGTGGATTAAACTTGTGTCCGGGATGGGGAAGGAGCAGGAGCTGCTGGAGGCGGCGCGGACTGGGAATGTGGGGCTGGTGGAGAAGCTCTTGAGTGGGAAGAAAGGATTGCTGGGCTCGGGCTCCGGCTCCATACCTCTGCCCGGGTTACTCAGGACTATTGGCCGGAGGAATGGGACAGTGGGGTACAGTGCAGGGCCTGGCTCTGTCCATCTGTCCACGGTGCTGGAAGTTGTGTCGTTTTCTCTCTGATAGCTCTGCAGTGTCACAGTTAGTGACGAAGCATCGCCCGGGGAGGATTCACATGGCCTTATCTTAAAATGAGGGCGGATCTATGACAGGTCAAAGGTCACCTGAAGAATTTGAGATTATGTGATCATGTTAAGAATGGAATACTAGATTTCACTGTATGCTTCCTACTATTTTTTCCTAAATTTACATGAATATGTGAATTTTCATTGAATGTGTGAATATGTGAATGGTGTCCAGTTATCCACTTGGAAATCATAATCTTTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_01147997_01150696.mRNA True 947 mRNA 0.51 2 1147545 1150963

Neighbor

gene id symbol gene type direction distance location
CI01000020_01120223_01142481 UHRF1BP1L coding upstream 4972 1120223 ~ 1142573 (+)
CI01000020_01083614_01106789 PLXNC1 coding upstream 40288 1083230 ~ 1107257 (+)
CI01000020_00959078_00971223 CRADD coding upstream 175546 959078 ~ 971999 (+)
CI01000020_00949140_00951237 SOCS2 coding upstream 194760 948756 ~ 952785 (+)
CI01000020_00934438_00935330 NA coding upstream 212189 934438 ~ 935356 (+)
CI01000020_01187688_01253805 NA coding downstream 36616 1187579 ~ 1254010 (+)
CI01000020_01275836_01316392 ANKS1B coding downstream 124873 1275836 ~ 1316392 (+)
CI01000020_01341579_01343530 NA coding downstream 189930 1340893 ~ 1344046 (+)
CI01000020_01375811_01378288 AVPR2L coding downstream 222201 1373164 ~ 1379068 (+)
CI01000020_01383268_01384854 DNAJB9B coding downstream 232305 1383268 ~ 1386041 (+)
G110743 NA non-coding upstream 78661 1057441 ~ 1068884 (+)
G110836 NA non-coding upstream 81380 1027444 ~ 1066165 (+)
G110738 NA non-coding upstream 170912 975669 ~ 976633 (+)
G110742 NA non-coding upstream 171962 974871 ~ 975583 (+)
G110822 NA non-coding upstream 177196 969393 ~ 970349 (+)
G110891 NA non-coding downstream 228715 1379678 ~ 1379912 (+)
G110892 NA non-coding downstream 229249 1380212 ~ 1380452 (+)
G110908 NA non-coding downstream 236375 1387338 ~ 1387541 (+)
G110909 NA non-coding downstream 236646 1387609 ~ 1387903 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 331035 810899 ~ 816510 (+)
G110589 NA other upstream 920697 180778 ~ 226848 (+)
G110562 NA other upstream 1099505 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 1293281 2443278 ~ 2444944 (+)
G111183 NA other downstream 1496548 2647511 ~ 2658913 (+)
G112679 NA other downstream 2150208 3301171 ~ 3303730 (+)
G112753 NA other downstream 2563418 3714381 ~ 3733586 (+)

Expression


Co-expression Network