CI01000020_01341579_01343530


Basic Information

Item Value
gene id CI01000020_01341579_01343530
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 1340893 ~ 1344046 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_01341579_01343530.mRNA
CCATAAAAGGCTACGATGAAGTCATGTCGATCAGTTTTGTGTCATTTGAGTGTATTTTCTTGATACAACACTGTCTGTTATGCTGAAACTCTGTTAAACATACCCCAAGCAGCTGTAACGAAGCACGTGGGCTACCCCAGAAACCTGGTGTGCGTTTCCACTTAGCTTTTAGGGGGCTTTGACACCGGGCACCGAATCTGGGTGCGATTGTTCCCGGCGCCCCCGACATCGTTGGTCTGGTTTCACACTCAGGCCCTGTCCCAAACGGTACCCTAAGCCCTCGCAATCTTCCTCCGAGTCCACACTTTCTTGACGTGTAGCCGCTTTGACTGTCGGGTAGAAGAGCTCGCGGCTTTGCGGGCTCTGCAAAAGTGCACATCAAGTGCGCATAACGGCCGCAACGACGGGGGCACTCGTGAGCACTCTTCTGAAACTTAAAATGACAAATGGGACATGAAGTGTACCATTAGGGACAAGGCCTCACTTGATTTAATTGAACCCCGGTGCACTTGCATACACAAACCAATGTGATCACAAATGGGCTGTTTTAGACACTCGTCGTCGTATATTTTGAACCCGATCCCACAATTCCGTCAACCCGTTATCACCTTTGAAAACGTGCGCTGAAAGTTCAGATGCGACGATAACTGTTATTTTTGTGGGGTCAAACTCATCAGGTACCCCTGATGACGAAAGGGCATTTTTGGGAGGACGCCCAGCATCCTAAAGCCAGCTGCCATGGCAACACTGGCCACGAGCCCATTAAGGGCTTCACCTCCTCTGCGGTCCACGACGGGAGAGGCGATCGAGAAATCACACCTGCCGAAGAGCAGCATTCATCCGTCAACGAGGGTATAACAAGCAGGGATCCTGTGGTTGACCCAATTTACAGTCTTCAGGCCAAAAAAGAACAAGAGAACACAAGAGAACACAAGAGAAGTGATGTGTACTTGAATAACCAATATATCATGGGAATAGAAGGGAACATCACCTGCCCTATTCCAAATATCAGTTATGTGTGTAAAGGGCAAAAAAGAAAGGAAAGAGGTAGACCTAGGCTAGAGTCAAATTGGACGGGCTGGAGGAGGATGTGACGGGTTATATAATGGTTTGCGAAGTGGGTTTGTTTTCACTTGACCTCCAGCTGCATTTCACCAGAACATAAGAGCTGAGAATGTAATAAGAGGAAAATGTAGTTCATGCTGCAGAAGATGTGGTTTGGGTGATATGATGTGTGATAAAATTGAAAACTAGACCTGTCAGAGGCCTGTGGGAAATTAAGTGCAGGGAGATGTACCTCCCTGCGCCGTCAAGTTTAATGTTAACGAAGCAAACCTATCTACTTAATGATCAACTTTTTCTGACAATTCTTATGAGTTGTTTGAGGGTTGGCTCCAAGGTAGATGTCCAGGAATGTGATTGAGCACCCCTGTTTTCAAGCAATGAAGGATAGTGGCTGATTGATTGAGAATGTAGCTGTGAGCGTGAAGGTCGTCACGCCAATCAAGGGCCTGCCTGATGTTCCCATCACAAAAGGGTTAATGAAAGGAATGTGCTGTCTGCTCCATGAGCAAGTAAGTGTACAGTGGGGTGAATGGTGGAATGACTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_01341579_01343530.mRNA True 1610 mRNA 0.47 3 1340893 1344046

Neighbor

gene id symbol gene type direction distance location
CI01000020_01275836_01316392 ANKS1B coding upstream 24501 1275836 ~ 1316392 (+)
CI01000020_01187688_01253805 NA coding upstream 86883 1187579 ~ 1254010 (+)
CI01000020_01147997_01150696 NA coding upstream 189930 1147545 ~ 1150963 (+)
CI01000020_01120223_01142481 UHRF1BP1L coding upstream 198320 1120223 ~ 1142573 (+)
CI01000020_01083614_01106789 PLXNC1 coding upstream 233636 1083230 ~ 1107257 (+)
CI01000020_01375811_01378288 AVPR2L coding downstream 29118 1373164 ~ 1379068 (+)
CI01000020_01383268_01384854 DNAJB9B coding downstream 39222 1383268 ~ 1386041 (+)
CI01000020_01395424_01397266 SPIC coding downstream 51080 1395126 ~ 1397343 (+)
CI01000020_01400705_01401757 NA coding downstream 54250 1398296 ~ 1402082 (+)
CI01000020_01416902_01441420 MYBPC1 coding downstream 72856 1416902 ~ 1441556 (+)
G110743 NA non-coding upstream 272009 1057441 ~ 1068884 (+)
G110836 NA non-coding upstream 274728 1027444 ~ 1066165 (+)
G110738 NA non-coding upstream 364260 975669 ~ 976633 (+)
G110742 NA non-coding upstream 365310 974871 ~ 975583 (+)
G110822 NA non-coding upstream 370544 969393 ~ 970349 (+)
G110891 NA non-coding downstream 35632 1379678 ~ 1379912 (+)
G110892 NA non-coding downstream 36166 1380212 ~ 1380452 (+)
G110908 NA non-coding downstream 43292 1387338 ~ 1387541 (+)
G110909 NA non-coding downstream 43563 1387609 ~ 1387903 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 524383 810899 ~ 816510 (+)
G110589 NA other upstream 1114045 180778 ~ 226848 (+)
G110562 NA other upstream 1292853 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 1100198 2443278 ~ 2444944 (+)
G111183 NA other downstream 1303465 2647511 ~ 2658913 (+)
G112679 NA other downstream 1957125 3301171 ~ 3303730 (+)
G112753 NA other downstream 2370335 3714381 ~ 3733586 (+)

Expression


Co-expression Network