CI01000020_02179764_02185141


Basic Information

Item Value
gene id CI01000020_02179764_02185141
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 2179419 ~ 2185166 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_02179764_02185141.mRNA
ATTTAAAAGGTAGCCTACGGCTTACATCACTGCACGTTCCCTCTCTTATGGTCAAACATTTGAAAGGACACGATTGGCTGAGTGTGATCAGCTGAAGCGCTGCGTCAATGCGAGCAGGAGTGCGCTCGTGAAAGCAGCTACAACTCAGAGACACAGCAGCAAACGCTCTTCAAACCAAATTAGATCACCATAGACTGCTTTCCGAAGCTTACTCCACGAAATCATAGTGATTAGTGTTTATTACAACCGCGCTTTAAGTTCATTTCATTTGCCTGGGGACGCTGGATATGGAGCTGGTTGGGTCTGAATAACAAACGCACACAAAGCGGATCAGCTCGAGCCGAGATGAGCGCGACTATGAGCGGCTCTGGGTCAGCGCCCTGTCGCTTCGCACATTACTTCATCATATGCGGAATAGACAACGAAACGGGTCTAGAGCCCGATGCTTTGGCAGGCTCATTCTCATTAGTCAGTCTCTTTAGCTACCTCTTATATTCAACTATGGATGTTGGTGGTTTCTTAGAAGGCCTGGCTGTCAAACATATTCTAGGCCTAAGGGTGTAGTATATGTCCTCTGAGTAGGATAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_02179764_02185141.mRNA True 589 mRNA 0.47 2 2179419 2185166

Neighbor

gene id symbol gene type direction distance location
CI01000020_02124037_02139813 GYS2 coding upstream 39589 2123158 ~ 2139830 (+)
CI01000020_02113206_02120765 LDHBB, LDHBA, LDHB coding upstream 58214 2113164 ~ 2121205 (+)
CI01000020_02105070_02110245 SLC25A3, SLC25A3A, SLC25A3B coding upstream 69100 2104226 ~ 2110319 (+)
CI01000020_02083977_02102990 TMPOA coding upstream 75937 2083977 ~ 2103482 (+)
CI01000020_02079089_02081777 STRAP.L, STRAP coding upstream 97569 2079089 ~ 2081850 (+)
CI01000020_02199397_02227367 DENND5B coding downstream 13748 2198914 ~ 2227529 (+)
CI01000020_02233314_02238917 FAM60A coding downstream 48148 2233314 ~ 2239889 (+)
CI01000020_02243585_02253875 CAPRIN2 coding downstream 58419 2243585 ~ 2254571 (+)
CI01000020_02292816_02297112 BTG1 coding downstream 107193 2292359 ~ 2297830 (+)
CI01000020_02351020_02353651 NA coding downstream 165854 2351020 ~ 2354384 (+)
G111049 NA non-coding upstream 23332 2153800 ~ 2156087 (+)
G111044 NA non-coding upstream 108658 2064054 ~ 2070761 (+)
G111084 NA non-coding upstream 154504 2024670 ~ 2024915 (+)
G111028 NA non-coding upstream 402935 1775994 ~ 1776484 (+)
G110967 NA non-coding upstream 454297 1715495 ~ 1725122 (+)
G111038 NA non-coding downstream 43464 2228630 ~ 2229561 (+)
G111141 NA non-coding downstream 140102 2325268 ~ 2325492 (+)
G111144 NA non-coding downstream 144119 2329285 ~ 2329506 (+)
G111160 NA non-coding downstream 189914 2375080 ~ 2376491 (+)
G111164 NA non-coding downstream 221065 2406231 ~ 2406463 (+)
CI01000020_01375811_01378288 AVPR2L other upstream 801070 1373164 ~ 1379068 (+)
CI01000020_01083614_01106789 PLXNC1 other upstream 1092646 1083230 ~ 1107257 (+)
CI01000020_00810993_00815495 CDPF1 other upstream 1362909 810899 ~ 816510 (+)
G110589 NA other upstream 1952571 180778 ~ 226848 (+)
G110562 NA other upstream 2131379 30693 ~ 48040 (+)
CI01000020_02444149_02444833 NA other downstream 259078 2443278 ~ 2444944 (+)
G111183 NA other downstream 462345 2647511 ~ 2658913 (+)
G112679 NA other downstream 1116005 3301171 ~ 3303730 (+)
G112753 NA other downstream 1529215 3714381 ~ 3733586 (+)
G113050 NA other downstream 2241492 4426658 ~ 4439762 (+)

Expression


Co-expression Network