CI01000020_02732766_02753514


Basic Information

Item Value
gene id CI01000020_02732766_02753514
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 2732696 ~ 2753514 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_02732766_02753514.mRNA
ATGGTTTCCTTCAATTGTTCTTTTCTAATGGAGAATGATGGTGAATTGACGGAGGACGATGTATTTAAATACCTGTCCAACCTGGGACAGTCAGCTACAGGACTCCAGCACACTTACCTATGCCTCTCTGTGCCAGGGCGAGACTTGAAAAATGTCTCCATTTTATGCAATTACATCTATCTACAAAAGCTAGAGCTTCCCTACAATAAAATCAAAGATCTATCCTGCGTGAGTCACATGCCACACCTCATCATACTGGATGCTTCCCACAACCATCTCACCGATTTTTTTGGATTCCAGCCGCCAAAAAATCTCAAGAGGGGGAATGTAATACACAAGATTGAGAATCTCCAGACTCTACGCAACCTGCAAGTTCTGGATTTGTCCTGTAACCGGATTCAAAGCCTCTCGGGTCTCCAGAACCTCCATCTCCTGGGAACCGTCAACCTTGAGAACAATCTGATCAGTGAGATAAAGGAGGCTGCACATTTGCATGACCTGATTTTATTGAGAGAAATGAATCTCCTGAGAAACCCAGTGCAGAACCAAGATGACTATAGACTGGCTGTGATCTTCCTCCTCCAGCACCTCATACTTCTGGACCAACACACTGTAACTGCAGAGGAGAAGGTGTCTGCTGTGAACAAGTACGACCCTCCTATGGAGGTGATCGCAGCCAGAGATCACATGACCCACTTGATGTACCAGCTCATGCAACCGCAGGTTATTTTTGACAGTACTCTTCCCAGTCTGGATGCTCCGTACCCCATGCTGGTCCTCACTGGCCCGCAGGCCTGTGGGAAGAGGGAACTTGCCCATAAGCTGTGCCAGGAATTCAGCGACTATTTTGCTTATGGAGCCTGCCACACCACCAGAGGGCCCTATTATGGTGAAGAGGATGGATCAGACTATCACTTTGTCACTGAGGAAGAATTTCAGAACATGATTCAAATGGGTCAGTTTGTCCAGACGATGCAATATGGAGGACATTGGTATGGCCTATCTCGGGAGTCTATTGAGCGTGTGGCTCGTGAAGGTCTGGCCTGCTGTGTGCATATGGAACTAGAGGGAGTGTATAGCTTGAAGAACTCATGTTTTGAGCCCCGTTACATCTTGCTGATCCCCACTGTGGTTGATAATTACGTCTGCTTTTTGAAAGCAAGAGGATTCTACAGCAACGCTCAGATGGAAACAGCCGTATCTCGCATTGATTTGTACACCAAGATCAACAGAGACAAGCCTGGCTTCTTTGATAACATCATCCCTTGTGATGATCGTGCTGAGGCCTACCGGATGCTAAAACAGCTGGTAAAAGAGTACCTGGGTCTAGAGGAGCAGGGAGGAGGAGATGACAGCAGCTCAGTCACACCTGACAACACCTCCACGAACGCAACTGTTGAGTTACTGGCAGCCAACACGACAGAGGCCATTGACCTCATGGACTCCTACAGCAGAAACTACAAGAACAAAATCCAGGCCAAGATGACCCCAGCAGAAATGACTTCCAATCACAGACGCCAGCAGCTAATTCGGGAAGCTTTGAGCGGGAAGAGTCCTGGTGCTTACGCCGAGCTGTTTCAGAGGAGTGCACCACCAGCTCCATCATCATTAGCCTCTCACTCCCTGCCTCCAGCAGGCCCCTCTTCCTCCTCAGTGCGTCCTGTTGGCCTCGGTGGTCCTGACCCCGATGAGGACAGCAGGCTCAAATATCAAAGTTTTCATCCCCAACTCAAAGTTAAAGCATTTAGGTACCTGACATGCCGCAGGCCATCTGGAAGATGTCACATGGACTCTGGTCTGACCCCTGATGCTCCTCGCTCAGTCTCTGAACGTGTCTCTCCAACACTCCCCTCCTCCCCGGGCCGGCCAGCTCAAGCCTACAGGGGTCATTCTATTCTCCTGTTTGTTGGTGAAAGAAAGAAAATCGCTCTGAGCGATCTTGGAGTGATGGATACTCCAGTTTTCAAAAACCCTGAATAAAATGTTAATAATCATTCCTGTAATATGAATGTGTAGTTTAAGAGAAAATGGCATGAGAACTTGCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_02732766_02753514.mRNA True 2050 mRNA 0.48 18 2732696 2753514

Neighbor

gene id symbol gene type direction distance location
CI01000020_02673393_02705226 COL7A1L coding downstream 26754 2673393 ~ 2705942 (-)
CI01000020_02669330_02673428 COL7A1L coding downstream 59268 2669330 ~ 2673428 (-)
CI01000020_02656577_02666104 NA coding downstream 66592 2656577 ~ 2666104 (-)
CI01000020_02651610_02655540 NA coding downstream 77156 2650788 ~ 2655540 (-)
CI01000020_02648116_02648559 UCN3L coding downstream 84137 2648029 ~ 2648559 (-)
CI01000020_02756005_02810495 EXOC4 coding upstream 2263 2755777 ~ 2810698 (-)
CI01000020_02828968_02849511 NA coding upstream 75249 2828763 ~ 2849518 (-)
CI01000020_02924213_02955174 NA coding upstream 169939 2923453 ~ 2955215 (-)
CI01000020_03272487_03278811 NA coding upstream 518929 3272443 ~ 3279198 (-)
CI01000020_03282336_03296954 NA coding upstream 528762 3282276 ~ 3297250 (-)
G112426 NA non-coding downstream 67032 2665405 ~ 2665664 (-)
G112424 NA non-coding downstream 99980 2632495 ~ 2632716 (-)
G112422 NA non-coding downstream 122570 2609926 ~ 2610126 (-)
G112414 NA non-coding downstream 135222 2596712 ~ 2597474 (-)
G112406 NA non-coding downstream 182773 2549718 ~ 2549923 (-)
G112520 NA non-coding upstream 196354 2949868 ~ 2950088 (-)
G112601 NA non-coding upstream 378165 3131679 ~ 3143233 (-)
G112644 NA non-coding upstream 422162 3175676 ~ 3179194 (-)
G112645 NA non-coding upstream 426625 3180139 ~ 3180451 (-)
G113138 NA non-coding upstream 446775 3200289 ~ 3200640 (-)
CI01000020_02121873_02122329 KISS2 other downstream 610322 2121714 ~ 2122619 (-)
G112136 NA other downstream 611464 2040034 ~ 2121232 (-)
CI01000020_01463785_01480876 GNPTAB other downstream 1247718 1463771 ~ 1481058 (-)
G111774 NA other downstream 1758055 973608 ~ 974641 (-)
G111674 NA other downstream 1914309 814110 ~ 887919 (-)
CI01000020_03304491_03309596 UBE2H other upstream 551386 3300912 ~ 3310248 (-)
G113375 NA other upstream 1007931 3761445 ~ 3847924 (-)
G113802 NA other upstream 1991005 4744519 ~ 4746050 (-)
G114747 NA other upstream 2771092 5524606 ~ 5525234 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_027227 lrguk coding NC_007115.7 CM002888.2 15819728 ~ 15840799 (+)