CI01000020_03272487_03278811


Basic Information

Item Value
gene id CI01000020_03272487_03278811
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 3272443 ~ 3279198 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_03272487_03278811.mRNA
AGAGCGGTTATGGGTTGAAGAGGTGATAAACAGTAACAAAACAACCACACAAATTTGCATTGTAGAAACAATACAACAAGAGCTTGAGAGATAAAGAAAGGGATATGAATTTATGGTTCTTTCACTTTGCAATATATGCAGCAACATTAGAATTCAAAATATGTCCTGTATCATATCTTAAACTCTTTCAATGTGTGATTTTTTTTTTTTTTTTTTGTGTTAATCTAAAGATATGAGTGCACTTCTAACCAAAAACATTAAAGAAAAATAAATAAAAAATAAATAAAACATTTCCCCCAGCAGTTTCATAAGATCAGTTTCCAAAATGTTAATATACCATGAATATGTAGAGTCTGTTCATTATCTGAAGTATAAAAGTTGAATGATATGGAGTGCTACATCTTCAGCCTTGTCATTGGTAAACCCCTCTCTCTTTCTCAATCCACCTCCGTTTCCACGCCCAGCTGTGAGCGGAGCAGCCTGGATTACTGCTGCAATCACATGGGGCAGGAGGTGGGCAATCTGTCCGGGTCGCAAGCTCATACGGGCAAAGTGGAAGTGTCTGTTGACTACGCTCTCCCAAACCTCCCCGTGCTGAAGCGTAAATTAGGTTTAATTGCGCAGCTTAAAGGTGAGGGCCTCGTTTTGGGCAGAGGCGGCTCTCTGGGACTCAGTGCTGGTTCAGATGAACAGTCAACATGTTTGGTTACACTGGGCTTCCCGGTGCTGACAGCTGGCTCTGTGATTAGACTATGCACTGATAATGGAGAGGATCAAAGCCCTTTAAGAGGGTTCCTCAGGGGGTTAGGGGGGAGCTTCTCTTTGGTCAATGGGGGCAATGGGGTAAGCCAGGACACTAGGTACGATAGGTCACTGGGAAATGGCCAGCAATTACTAAGCACTGTATGTCGGGAGAAGAAAGTTGCAAATGGAGATCAGGCTTGATATGAAGCTTATTCCAGTAAAATAATGTGTAAGGCTATAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_03272487_03278811.mRNA True 989 mRNA 0.42 5 3272443 3279198

Neighbor

gene id symbol gene type direction distance location
CI01000020_02924213_02955174 NA coding downstream 317228 2923453 ~ 2955215 (-)
CI01000020_02828968_02849511 NA coding downstream 422932 2828763 ~ 2849518 (-)
CI01000020_02756005_02810495 EXOC4 coding downstream 461745 2755777 ~ 2810698 (-)
CI01000020_02732766_02753514 NA coding downstream 518929 2732696 ~ 2753514 (-)
CI01000020_02673393_02705226 COL7A1L coding downstream 566501 2673393 ~ 2705942 (-)
CI01000020_03282336_03296954 NA coding upstream 3078 3282276 ~ 3297250 (-)
CI01000020_03304491_03309596 UBE2H coding upstream 25221 3300912 ~ 3310248 (-)
CI01000020_03335308_03338805 ZC3HC1 coding upstream 55774 3334972 ~ 3339019 (-)
CI01000020_03350468_03358669 CAX1 coding upstream 71255 3350453 ~ 3358669 (-)
CI01000020_03362565_03367403 SMO coding upstream 83178 3362376 ~ 3367559 (-)
G113174 NA non-coding downstream 46891 3225240 ~ 3225552 (-)
G113162 NA non-coding downstream 67438 3204773 ~ 3205005 (-)
G113139 NA non-coding downstream 69154 3202959 ~ 3203289 (-)
G113138 NA non-coding downstream 71803 3200289 ~ 3200640 (-)
G112645 NA non-coding downstream 91992 3180139 ~ 3180451 (-)
G113160 NA non-coding upstream 112631 3391829 ~ 3445455 (-)
G113231 NA non-coding upstream 173422 3452620 ~ 3452938 (-)
G113249 NA non-coding upstream 193349 3472547 ~ 3472806 (-)
G113254 NA non-coding upstream 200147 3479345 ~ 3479635 (-)
CI01000020_02121873_02122329 KISS2 other downstream 1150069 2121714 ~ 2122619 (-)
G112136 NA other downstream 1151211 2040034 ~ 2121232 (-)
CI01000020_01463785_01480876 GNPTAB other downstream 1787465 1463771 ~ 1481058 (-)
G111774 NA other downstream 2297802 973608 ~ 974641 (-)
G113375 NA other upstream 482247 3761445 ~ 3847924 (-)
G113802 NA other upstream 1465321 4744519 ~ 4746050 (-)
G114747 NA other upstream 2245408 5524606 ~ 5525234 (-)
CI01000020_05958448_05959900 NA other upstream 2679253 5958221 ~ 5960015 (-)

Expression


Co-expression Network