CI01000020_03761716_03806609 (NELL2B)


Basic Information

Item Value
gene id CI01000020_03761716_03806609
gene name NELL2B
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 3761716 ~ 3806914 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_03761716_03806609.mRNA
ATGGGATTATTCAAACTTTATTTTGCGCTTTGCGCTGTCGGACTTTTCTATGGTTTCGGAGTTGATCCAGCATTACATGTGGACGTCTTCCAGGAGTTTGATCTTGTGAGGTCAAGTGCTGGAGTCTCCCAGGTACAGGGGTTCCACAATGAGAGCAGAGCATATCTGTTTGAAGGTGGCACCTCCACAGTATTGATTGGCGCTCCAGTAAATGCCAGTGGGATTGCGGAATTGGGATCTAACAGACAGGCTCCGAGACAAGGCTCATCAAGGAATGCAAGAGCTTCCCTCAAGGCAGCAGAGAGAATTCTTCAGAAGTTGAGAGGAAAAACAGAGTTCACTCTTCTAATGACCCTCAAACAGGAGAAATTCAGCTCAGGAGTGCTGCTGTCCATCCACTATGGAGAACAGAGGTTTCTGGAGGTAGAGAGCAGCGGTCTGCGTAATGAGATCCGTCTCTTCTTCCAAACCTCAGACCAGCGGCAGCAGAAAGAGGTCTTCCCCTATAGTCTGGCAGATGGACACTGGCACAAAGTCTCCCTGGCATTCAGTGCCACCCAAGTGGTGCTCCATATTGACTGCAACAGAATTTATGAAAGGATTGTGGAGGCACCATCTATGGACTTTCCCAGAGGAACAAACATCTGGCTTGGTCAAAGAAATGACGCCCATGGTTTCTTCAGGTTGGCACTTGCCGAAGAGAAGATGAAGTACTTGGATGGCTGTTACTGTGAGAGGACGTGCACCCTGAATGGAGAGATATACAGGGACGATGATGCTTGGATAGATGGATGCAGAAACTGCACATGCTCAAACGGTACAGTGGAGTGTGAGAGTATTTTCTGCCCACCACCTCAGTGCCCCCCTGATACAGCTCCAATCTACATGCCTGGAGCATGCTGTAAAGAGTGCCAGCCCGTGTGTCTGTTCAGAGGAAGAGTGTACGTGGAAGGTGATCGCAAGAGCGTACACGACTCTGAGGGAAACTGTCTGCTGTTTGAATGCAGGGATCGAAGTATGCATAGGGTTGAAATGACTCCTTGTCCAGAACTAAACTGCCCAGAGTCAGAGCAGATCACACTCACAGACCGCTGCTGCAAAGTGTGCAGAGGGCATGATTTCTGTGCTGAGGGTCACAACCGCAATTGTGTGGAGAATTCGGACTGCATTAATCTAGAGGCAGGAGCTTGCTGCAGCTGTAAAGAGGGATACCATGCGCTCAGGGACGACAGTGCCTACTGCCAAGATATCGATGAGTGTGCAGAGGGGAAACACTACTGCAGGGAGAACACAATGTGTATGAACACACCTGGCTCCTTCATGTGTGTCTGTCACACCGGTTACGTCCGTATTGATGATTACTCCTGCACAGAGCATGATGAGTGTGTGCGTGGACTGAATACTTGTGACGAAAACGCTCTTTGCTTCAATACGGTTGGCGGACACAGTTGTTCCTGTAAACCAGGGTACGTCGGTAACGGGACTGTCTGCAGAGCACTTTGTGAGGGCCAGTGTCTCAACGGAGGTTCTTGCGTCAATCCAGATACCTGCATCTGCCAGCAAGGCTTCACTGGAAAGAGATGTGAGACAGACATCGACGAGTGCTCAGATGGATTTGTGGAGTGTGACAGTCGAGCCACTTGCGTCAACCTACCTGGCTGGTACCACTGCGAGTGTCGTGATGGATACCATGACAACGGAATGTTCTCAGCCAATGGAGAGTCATGTGAAGACATTGATGAATGTGAGACGGGGAGGCACAGCTGTGCTAATGACACCGTGTGCTTTAATGTGGACGGAGGTTACGACTGCCGCTGTCCGCACGGTAGGAACTGCACGGGAGACTGCGCCCACGACGGGAAGGTGAAACACAACGGGCAGATCTGGGTGCTGGATGACGACAGGTGCTCGGTCTGCTCTTGTCAGTCGGGGTTGGTGATGTGCAGACGGATGGTGTGTGATTGTGAGAATCCCACCGTGGATGTGTTGTGCTGTCCTGAATGCGATCCTCGTCTGAGTTCTCAGTGTTTGCATCAGAACGGTCTGCTTGCATACAGTAATGGAGAGACCTGGGTGGAGAACTGCCAGCAGTGCCAGTGTATGATTCAGATCTATTACAGAGAAACTGCAGAGAAACTGCTGGTCACAGTGGAACTTTCTGCAATATCTCAGTCAGGAAGTCTTGCACCAAATGTCGAACAATGTAGTTTTCAGCCCCTCTGGTGTTTGTCCCTCCTGCAATTTTTCTTTCTTTATACAGAACTTTTTGCACTCTGCGAAGAATTGATGGAGTCCAGCTCCATCTTTCTCTCTAGTGAAAATCCTTGCTACAGTATTTGCTGAACTGACAATGGGCTCAAACAGAGCTCCTAAACTTGTCAGAGGTTTTCGTGACATGCCAGGCTCCCAGTTCACATTTTCTCTGTCTGAGAAGGTTTTTAGTACACAGAGAATGAAGCTTTTCCCTCAGGATTTAGGACTGCTAAACTTGTAGGTCTGTAATGAATTCTGTTAAAGACTTCTGGACAGTTGTGGACTGCATAACAGACGGAAGGCTAATGCTAAAGCCAGGCTCTGGATTAATTGCTCAATAACTGACTTTCAATTGAAAACCCTTTTTAATCCTACACAAGTGTAATCTGTGTCCA

Function

symbol description
nell2b Predicted to enable heparin binding activity and protein kinase C binding activity. Predicted to be active in cytoplasm. Orthologous to human NELL2 (neural EGFL like 2).

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_03761716_03806609.mRNA True 2648 mRNA 0.49 18 3761716 3806914

Neighbor

gene id symbol gene type direction distance location
CI01000020_03660304_03682653 PLXNB2A coding upstream 78681 3660304 ~ 3683035 (+)
CI01000020_03632947_03634207 NA coding upstream 127438 3632947 ~ 3634278 (+)
CI01000020_03623678_03625344 NA coding upstream 135692 3623534 ~ 3626024 (+)
CI01000020_03405045_03408250 AKR1B1 coding upstream 353443 3405045 ~ 3408273 (+)
CI01000020_03397866_03404516 PRDM4 coding upstream 357006 3397866 ~ 3404710 (+)
CI01000020_03840431_03846507 TWF1, TWF1B coding downstream 32688 3839602 ~ 3847229 (+)
CI01000020_03848839_03853256 PUS7L coding downstream 41925 3848839 ~ 3853630 (+)
CI01000020_03957225_03966342 PRICKLE1B, PRICKLE1 coding downstream 150311 3957225 ~ 3966942 (+)
CI01000020_03985890_03988606 ZCRB1 coding downstream 178976 3985890 ~ 3988936 (+)
CI01000020_03989813_04001907 YAF2 coding downstream 182899 3989813 ~ 4002822 (+)
G112827 NA non-coding upstream 3517 3757861 ~ 3758199 (+)
G112819 NA non-coding upstream 15101 3746382 ~ 3746615 (+)
G112806 NA non-coding upstream 47871 3713232 ~ 3713845 (+)
G112769 NA non-coding upstream 64208 3696585 ~ 3697508 (+)
G112760 NA non-coding upstream 65574 3689456 ~ 3696142 (+)
G112848 NA non-coding downstream 50844 3857758 ~ 3858264 (+)
G112861 NA non-coding downstream 168957 3975871 ~ 3985375 (+)
G112897 NA non-coding downstream 186107 3993021 ~ 4051603 (+)
G112911 NA non-coding downstream 252987 4059901 ~ 4060168 (+)
G112919 NA non-coding downstream 265508 4072422 ~ 4072638 (+)
G112753 NA other upstream 28130 3714381 ~ 3733586 (+)
G112679 NA other upstream 457986 3301171 ~ 3303730 (+)
G111183 NA other upstream 1102803 2647511 ~ 2658913 (+)
CI01000020_02444149_02444833 NA other upstream 1311909 2443278 ~ 2444944 (+)
CI01000020_01375811_01378288 AVPR2L other upstream 2383367 1373164 ~ 1379068 (+)
G113050 NA other downstream 619744 4426658 ~ 4439762 (+)
CI01000020_04760482_04774849 NA other downstream 953098 4760012 ~ 4776083 (+)
CI01000020_04807118_04808453 NA other downstream 1000113 4806765 ~ 4809414 (+)
CI01000020_05267250_05267668 MRPS33 other downstream 1460123 5267250 ~ 5268673 (+)
G113929 NA other downstream 1815793 5622707 ~ 5625232 (+)

Expression


Co-expression Network