CI01000020_04429666_04431268


Basic Information

Item Value
gene id CI01000020_04429666_04431268
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 4429507 ~ 4431838 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_04429666_04431268.mRNA
AAAGAAAATCTTTTCAAGTACCCTCTGTTTGGGCATTTGTTGTTCCAGCAGGCTACCACTCAGTCAAGCAAGGACAATTAAGATAAGTCCCATCTGCACATCCATCTATCATCCTCTGGGCAATTTGTTCTCTGCTGCTGTAAATTAAAAACTCAGCTTACACTGGTTTATGAGATGTAGTTGGTGGCAAAGTGAGCCGGGAGAGGCACTCCTCATTATTAAGCATAATTAAGCTGCCAACCTTGTCACCCCTGACTGCGGACGCATGGTCAAACTCTGCCGAAGCTTCAATTCAAATCATGGCCCGAATTCGGTTCTGTCACCTGTGCTCGATCAGAACAAGATGCAAATAACCCCTCAATTCCACATCATGTTCATTAAGGTCAGATGAGGTCTTTGATGCTTAATTACGCTTCTGCAGCTCATCTGAGACGTGCCTTGACTGCGTTGTTTGAATGCAGAAGGAGACCTTATTGTGTGTGACTGTTTTACTAATAAATCTATTTCTACATTATGTCAAGACAAGAGGAGAAATAAGGTACCTTAAGCTCACCCCTCACCTCTGAAACAATGGTTAGAACTTGGTCTTTTCTCAGTGGATGGAAGAAGGAAGGCACCGCTGATTCAGAAAGTATTGGTATTCCCCTTAGCATGCGTCAGCCGGCCAGCTGGAACAGGAAGAGTGGTGGGGGGCAGAAAGGGAACTTAACTTCTACATGTGAAATTGATGTGCCGGGCATGTATGCATCTGTTGGTATTGTCTGTTCTGACAGTGGGAATGAGGAAAGATTCACTACCCACTGTATCACTGACTATTCTCTGGCCACGACAAACAACCCAAATGCATTAGGGGTGGGACTGAAAGGGGGCAAAAAATGGCGCGTACAACACAAACGAAGCCCAGGCTGACACACACAAATTGCCTGGTGGCTCAAAATGATGCTGATGTCAGTCAGAGAGCAATTTATCATCAATGGCAAAAATAGCCCCACATGCTGCAAGCCATTTTGCCATGATAACGGCCTAATGGGAAGGTTTTGAACTCTCTAAAATAACACTCCAAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_04429666_04431268.mRNA True 1068 mRNA 0.45 2 4429507 4431838

Neighbor

gene id symbol gene type direction distance location
CI01000020_04355618_04370211 CAND1 coding downstream 59296 4354761 ~ 4370211 (-)
CI01000020_04346950_04352611 NA coding downstream 76896 4346813 ~ 4352611 (-)
CI01000020_04318813_04320384 DYRK2 coding downstream 108571 4317553 ~ 4320936 (-)
CI01000020_04220852_04223533 CALU, CALUA coding downstream 205974 4219833 ~ 4223533 (-)
CI01000020_04195892_04207990 TNPO3 coding downstream 221336 4195892 ~ 4208171 (-)
CI01000020_04554143_04568636 NA coding upstream 121973 4553811 ~ 4568756 (-)
CI01000020_04637032_04643113 NA coding upstream 204721 4636559 ~ 4643530 (-)
CI01000020_04685535_04686179 NA coding upstream 253635 4685473 ~ 4688008 (-)
CI01000020_04705594_04712665 WIF1 coding upstream 273756 4705594 ~ 4712665 (-)
CI01000020_04777561_04778079 NA coding upstream 345654 4777492 ~ 4779410 (-)
G113581 NA non-coding downstream 48214 4381025 ~ 4381293 (-)
G113550 NA non-coding downstream 156587 4272717 ~ 4272920 (-)
G113525 NA non-coding downstream 218849 4210440 ~ 4210658 (-)
G113522 NA non-coding downstream 219789 4209394 ~ 4209718 (-)
G113382 NA non-coding downstream 619250 3805725 ~ 3810257 (-)
G113729 NA non-coding upstream 169554 4601392 ~ 4601835 (-)
G113789 NA non-coding upstream 241118 4672956 ~ 4673336 (-)
G113793 NA non-coding upstream 258251 4690089 ~ 4690321 (-)
G113800 NA non-coding upstream 310319 4742157 ~ 4742378 (-)
G113801 NA non-coding upstream 310942 4742780 ~ 4744239 (-)
G113375 NA other downstream 581583 3761445 ~ 3847924 (-)
CI01000020_03304491_03309596 UBE2H other downstream 1094945 3300912 ~ 3310248 (-)
CI01000020_02828968_02849511 NA other downstream 1579989 2828763 ~ 2849518 (-)
CI01000020_02121873_02122329 KISS2 other downstream 2307133 2121714 ~ 2122619 (-)
G112136 NA other downstream 2308275 2040034 ~ 2121232 (-)
G113802 NA other upstream 312681 4744519 ~ 4746050 (-)
G114747 NA other upstream 1092768 5524606 ~ 5525234 (-)
CI01000020_05958448_05959900 NA other upstream 1526613 5958221 ~ 5960015 (-)
G114926 NA other upstream 1727472 6159310 ~ 6162609 (-)

Expression


Co-expression Network