Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000020_04807118_04808453 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000020 |
| NCBI id | null |
| chromosome length | 7209782 |
| location | 4806765 ~ 4809414 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000020_04807118_04808453.mRNA | False | 1205 | mRNA | 0.38 | 4 | 4806765 | 4808849 |
| TU128430 | False | 1011 | TUCP | 0.36 | 4 | 4807027 | 4808872 |
| TU128432 | False | 1553 | TUCP | 0.36 | 4 | 4807027 | 4809414 |
| TU128433 | False | 1113 | TUCP | 0.35 | 4 | 4807027 | 4808974 |
| TU128434 | True | 1500 | TUCP | 0.36 | 4 | 4807027 | 4809361 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000020_04760482_04774849 | NA | coding | upstream | 30682 | 4760012 ~ 4776083 (+) |
| CI01000020_04733481_04740265 | MSRB3 | coding | upstream | 66500 | 4733481 ~ 4740265 (+) |
| CI01000020_04713721_04722425 | LEMD3 | coding | upstream | 83048 | 4713721 ~ 4723717 (+) |
| CI01000020_04679937_04682501 | TMBIM4 | coding | upstream | 123683 | 4679835 ~ 4683082 (+) |
| CI01000020_04646413_04669776 | GRIP1 | coding | upstream | 136691 | 4646084 ~ 4670074 (+) |
| CI01000020_04813284_04816943 | IRAK3 | coding | downstream | 4435 | 4813284 ~ 4817103 (+) |
| CI01000020_04818050_04818245 | NA | coding | downstream | 8350 | 4817199 ~ 4818245 (+) |
| CI01000020_04819543_04826613 | NA | coding | downstream | 10694 | 4819543 ~ 4826782 (+) |
| CI01000020_04827882_04835758 | NA | coding | downstream | 18402 | 4827251 ~ 4836019 (+) |
| CI01000020_04837068_04844947 | DERA | coding | downstream | 28219 | 4837068 ~ 4845982 (+) |
| G113088 | NA | non-coding | upstream | 712 | 4805833 ~ 4806053 (+) |
| G113057 | NA | non-coding | upstream | 105041 | 4693855 ~ 4701724 (+) |
| G113069 | NA | non-coding | upstream | 126093 | 4680289 ~ 4680672 (+) |
| G113060 | NA | non-coding | upstream | 215652 | 4585068 ~ 4591113 (+) |
| G113048 | NA | non-coding | upstream | 391560 | 4409512 ~ 4415205 (+) |
| G113098 | NA | non-coding | downstream | 93243 | 4902092 ~ 4902684 (+) |
| G113099 | NA | non-coding | downstream | 93981 | 4902830 ~ 4903283 (+) |
| G113102 | NA | non-coding | downstream | 105172 | 4914021 ~ 4914271 (+) |
| G113058 | NA | non-coding | downstream | 131562 | 4940411 ~ 4943891 (+) |
| CI01000020_05038237_05069897 | NA | non-coding | downstream | 247481 | 5037139 ~ 5070313 (+) |
| G113050 | NA | other | upstream | 367003 | 4426658 ~ 4439762 (+) |
| G112753 | NA | other | upstream | 1073179 | 3714381 ~ 3733586 (+) |
| G112679 | NA | other | upstream | 1503035 | 3301171 ~ 3303730 (+) |
| G111183 | NA | other | upstream | 2147852 | 2647511 ~ 2658913 (+) |
| CI01000020_05267250_05267668 | MRPS33 | other | downstream | 458188 | 5267250 ~ 5268673 (+) |
| G113929 | NA | other | downstream | 813858 | 5622707 ~ 5625232 (+) |
| G114094 | NA | other | downstream | 994203 | 5803052 ~ 5805718 (+) |
| CI01000020_05960777_05981596 | NA | other | downstream | 1170912 | 5960777 ~ 5982298 (+) |
| G114382 | NA | other | downstream | 1783375 | 6592224 ~ 6593564 (+) |
| CI01000020_04868249_04868956 | MGST1.2 | coding | downstream | 43518 | 4867304 ~ 4869071 (+) |
| CI01000020_04870746_04871405 | MGST1.1, MGST1 | coding | downstream | 46561 | 4870347 ~ 4871868 (+) |
| CI01000020_04900806_04906259 | NA | coding | downstream | 76371 | 4900157 ~ 4907594 (+) |
