CI01000020_05023157_05024184


Basic Information

Item Value
gene id CI01000020_05023157_05024184
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 5023157 ~ 5024293 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_05023157_05024184.mRNA
TGACTGGTATCCCTGCCAGCGCCTCCATTTTGGAGTTTGGAGTTCCCCAAGGCCAGCTTTCCCAAAGGGACCACAAGAAGGAGGCAAGTTTTGTGCATTTCTTCCTTTCTTTGCATCTAACACGGATGTATTCCCTTTTCCGTCCTTTCCCAAGAGCCTGTCAATCCACACCCAAAACAAAGACAACAAAGGAATCCCCAATGGAACCAGGCCATCCTCAGAAGCATATAGCGCCAAGAAGATACTCTCCACACCCATGATTGTGAGCCCGGAGTTTGAGACTCGCACCCACTCTCCTGCGATGAGCGCTATTCCCAAGCTGAGCTGCTACAGGCAAAACTCACCACGAATTAAGACGGCAGAGTCGAGCAGCATTAAACGTGATACAGATTTGAAGTCAGAACTAACTTTGTTATTCAAGAGCAAAACATGCTGCTTCATTCAGGTTTTGGGGGAGTTTAGGAGATACGGGCGCATGCACACAAATTAAATATGCAAAAAGTACATATCCTACATAAAATGTAAACAATTTAAGTGTGTTCGTAGTGTTTTAACTCAAGAAAATCATGTATTTTTTATGTAAAAATAAGTAACAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_05023157_05024184.mRNA True 599 mRNA 0.43 4 5023157 5024293

Neighbor

gene id symbol gene type direction distance location
CI01000020_04926506_04934038 NA coding upstream 88915 4925555 ~ 4934242 (+)
CI01000020_04900806_04906259 NA coding upstream 115563 4900157 ~ 4907594 (+)
CI01000020_04870746_04871405 MGST1.1, MGST1 coding upstream 151289 4870347 ~ 4871868 (+)
CI01000020_04868249_04868956 MGST1.2 coding upstream 154086 4867304 ~ 4869071 (+)
CI01000020_04837068_04844947 DERA coding upstream 177175 4837068 ~ 4845982 (+)
CI01000020_05038237_05069897 NA coding downstream 12846 5037139 ~ 5070313 (+)
CI01000020_05091059_05093805 RERGL, RERGLA coding downstream 66766 5091059 ~ 5094794 (+)
CI01000020_05108357_05112394 NA coding downstream 83986 5108279 ~ 5112552 (+)
CI01000020_05132989_05135436 NA coding downstream 108184 5132477 ~ 5135458 (+)
CI01000020_05143320_05161129 CNOT4B coding downstream 118880 5143173 ~ 5162759 (+)
G113058 NA non-coding upstream 79266 4940411 ~ 4943891 (+)
G113102 NA non-coding upstream 108886 4914021 ~ 4914271 (+)
G113099 NA non-coding upstream 119874 4902830 ~ 4903283 (+)
G113098 NA non-coding upstream 120473 4902092 ~ 4902684 (+)
G113088 NA non-coding upstream 217104 4805833 ~ 4806053 (+)
G113970 NA non-coding downstream 73849 5098142 ~ 5098363 (+)
G113975 NA non-coding downstream 155018 5179311 ~ 5200382 (+)
G113955 NA non-coding downstream 270688 5294981 ~ 5299565 (+)
CI01000020_05490931_05500137 NA non-coding downstream 469328 5490931 ~ 5500137 (+)
CI01000020_04807118_04808453 NA other upstream 199371 4806765 ~ 4809414 (+)
CI01000020_04760482_04774849 NA other upstream 229896 4760012 ~ 4776083 (+)
G113050 NA other upstream 583395 4426658 ~ 4439762 (+)
G112753 NA other upstream 1289571 3714381 ~ 3733586 (+)
G112679 NA other upstream 1719427 3301171 ~ 3303730 (+)
CI01000020_05267250_05267668 MRPS33 other downstream 242744 5267250 ~ 5268673 (+)
G113929 NA other downstream 598414 5622707 ~ 5625232 (+)
G114094 NA other downstream 778759 5803052 ~ 5805718 (+)
CI01000020_05960777_05981596 NA other downstream 955468 5960777 ~ 5982298 (+)
G114382 NA other downstream 1567931 6592224 ~ 6593564 (+)

Expression


Co-expression Network