CI01000020_05816151_05820574


Basic Information

Item Value
gene id CI01000020_05816151_05820574
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 5815663 ~ 5820886 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_05816151_05820574.mRNA
GTATAAAAACTGCAACATCATAGTACAAGAATCTGATCTACTACCGTAGTTTGCTGAGAAATACATCTTTCAGCACCAGCACTAAAAGCCTCCTTTAAATATGGGTGTGTCTGACTTATTTGCACAATTATTTTGAGCAATACACTCGCAAAGCGACCACACGCAGTTTGTTAGATTGCACAAGCAAATTAGTACAGCTTTATTTGGAATCTTAGTAACTTGGGTCAGAGGAATAACTAATCAAGTAAAACTGCTGTTGTTATGGCAGTTCTCTTGATAGATACAGCCAAAGAAACTATCTGTTCAACAGCACTAGACCAGACACTGTGAAAATATAATGACCTGAGACACAAATTCTGCCAAATTTGTCGCTCTCCCAGTGAGCAAGGAAACAAGGTCGGATAAAAGTAAGGGAAAAGCAGAAGGAAAAAAAATCCAAGTGAAGAGGAGATGAAGTGAGAATGATAAGAAAGAGGTGAAAGAGAGAAATGACTTCGGAAAGAGCTGGCAGGAGCCACGGGCCAGAACATCTGCTCATGGGAGAGGCTCTGCCTCGGGCTACCAGCTGCCCCAGGAGAGTGAGGGAAGTGAGGAAAGAAGGAATAAAAAGTGAAAGAGTGCTGCAGATGGTTTTGGGCGCTACCTGTTTATTTAAGCCAGAACAATGGTGTGCTTCAAAACACACGTCGTCGATCCTGACACGGTTTTGGCAAAAGTTCTCCTTCTCTCTGTTCTCTCAATGGGCTAAGTGTGTGGTTCGGTCTTGTCGGTTTTGTGCTTGAGAGAACCTAGATTTTAGAAACAGAGATTTGCTTAACACGCTGTTTCGCATATTGCTTTAAGCTCTGGGATATGAATAAGCCTGTAGTTTCGCTTCATTTTAACTTGCTCTCGCATGCAACCGGTCGCAGGTTTTGGTAAGTTGCCCCGGTAACCGTGCTGGATCTCGGCCTATGAGAGCTCAGTCTGCTCGATTGACAGCTAGTGGAGGGCTGCCGAGAGCGGACCGTCACCCACGGGCCAACATTTGATTCCTGTGACACCAACAGGAAACATAATCACTGTGTCAAATCTCTTTATGCACATTAGGTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_05816151_05820574.mRNA True 1094 mRNA 0.44 2 5815663 5820886

Neighbor

gene id symbol gene type direction distance location
CI01000020_05651021_05656758 NET1 coding upstream 158759 5650779 ~ 5656904 (+)
CI01000020_05636849_05648400 NA coding upstream 167241 5635351 ~ 5648422 (+)
CI01000020_05569133_05573180 NA coding upstream 241856 5568383 ~ 5573807 (+)
CI01000020_05536783_05538245 NA coding upstream 277277 5536783 ~ 5538386 (+)
CI01000020_05514885_05515490 NA coding upstream 299968 5514885 ~ 5515695 (+)
CI01000020_05941404_05941840 NA coding downstream 120518 5941404 ~ 5941885 (+)
CI01000020_05942995_05951650 PRMT8B, PRMT8 coding downstream 121040 5941926 ~ 5952403 (+)
CI01000020_05960777_05981596 NA coding downstream 139891 5960777 ~ 5982298 (+)
CI01000020_05988468_05989551 NA coding downstream 167365 5988251 ~ 5989553 (+)
CI01000020_06000788_06005009 NA coding downstream 179841 6000727 ~ 6005136 (+)
G114085 NA non-coding upstream 31920 5783516 ~ 5783743 (+)
G114084 NA non-coding upstream 32382 5783057 ~ 5783281 (+)
G113915 NA non-coding upstream 98521 5715663 ~ 5717142 (+)
G114070 NA non-coding upstream 104753 5710643 ~ 5710910 (+)
G114060 NA non-coding upstream 146806 5668649 ~ 5668857 (+)
G114117 NA non-coding downstream 26667 5847553 ~ 5847781 (+)
G114127 NA non-coding downstream 74741 5895627 ~ 5895917 (+)
G114168 NA non-coding downstream 113626 5934512 ~ 5975712 (+)
G114153 NA non-coding downstream 166505 5987391 ~ 5987951 (+)
G114151 NA non-coding downstream 192069 6012955 ~ 6013436 (+)
G114094 NA other upstream 9945 5803052 ~ 5805718 (+)
G113929 NA other upstream 190431 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 546990 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 991877 4806765 ~ 4809414 (+)
CI01000020_04760482_04774849 NA other upstream 1022402 4760012 ~ 4776083 (+)
G114382 NA other downstream 771338 6592224 ~ 6593564 (+)
G114389 NA other downstream 777460 6598346 ~ 6600180 (+)
G114388 NA other downstream 803381 6617328 ~ 6644816 (+)
CI01000020_06769551_06772924 NA other downstream 941001 6769310 ~ 6774074 (+)

Expression


Co-expression Network