CI01000020_05941404_05941840


Basic Information

Item Value
gene id CI01000020_05941404_05941840
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000020
NCBI id null
chromosome length 7209782
location 5941404 ~ 5941885 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000020_05941404_05941840.mRNA
TTAATCCGGATCCCGTTGGCTCGCATGGGACTGAGGCACTCATCGCGGTGCCTGCTCCTGCGGAGAAAGATGGCGGATGCGGAGAGCTCGGAGGCGAAAGAACAGCGAGATCCAAAGCAGAAAGCAGAGCAGAACACGTCCAGTTCCCTCGTCCTGAAAGATTCGCGATCACACACCACACCGAAAGCTAAATTGAGAGGTTTAGCCTATATTAATATTTATGGTGCGCGTAGGTTGCGTAAAGATTAAGCAGACATATCTGATGCGAGATGCCTCTTAGAAACCTCGAGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000020_05941404_05941840.mRNA True 294 mRNA 0.51 2 5941404 5941885

Neighbor

gene id symbol gene type direction distance location
CI01000020_05816151_05820574 NA coding upstream 120518 5815663 ~ 5820886 (+)
CI01000020_05651021_05656758 NET1 coding upstream 284500 5650779 ~ 5656904 (+)
CI01000020_05636849_05648400 NA coding upstream 292982 5635351 ~ 5648422 (+)
CI01000020_05569133_05573180 NA coding upstream 367597 5568383 ~ 5573807 (+)
CI01000020_05536783_05538245 NA coding upstream 403018 5536783 ~ 5538386 (+)
CI01000020_05942995_05951650 PRMT8B, PRMT8 coding downstream 41 5941926 ~ 5952403 (+)
CI01000020_05960777_05981596 NA coding downstream 18892 5960777 ~ 5982298 (+)
CI01000020_05988468_05989551 NA coding downstream 46366 5988251 ~ 5989553 (+)
CI01000020_06000788_06005009 NA coding downstream 58842 6000727 ~ 6005136 (+)
CI01000020_06035989_06042016 TMTC2A coding downstream 94104 6035989 ~ 6042020 (+)
G114127 NA non-coding upstream 45487 5895627 ~ 5895917 (+)
G114117 NA non-coding upstream 93623 5847553 ~ 5847781 (+)
G114085 NA non-coding upstream 157661 5783516 ~ 5783743 (+)
G114084 NA non-coding upstream 158123 5783057 ~ 5783281 (+)
G113915 NA non-coding upstream 224262 5715663 ~ 5717142 (+)
G114153 NA non-coding downstream 45506 5987391 ~ 5987951 (+)
G114151 NA non-coding downstream 71070 6012955 ~ 6013436 (+)
G114200 NA non-coding downstream 128219 6070104 ~ 6070316 (+)
G114216 NA non-coding downstream 154759 6096644 ~ 6096879 (+)
G114217 NA non-coding downstream 155606 6097491 ~ 6097716 (+)
G114094 NA other upstream 135686 5803052 ~ 5805718 (+)
G113929 NA other upstream 316172 5622707 ~ 5625232 (+)
CI01000020_05267250_05267668 MRPS33 other upstream 672731 5267250 ~ 5268673 (+)
CI01000020_04807118_04808453 NA other upstream 1117618 4806765 ~ 4809414 (+)
CI01000020_04760482_04774849 NA other upstream 1148143 4760012 ~ 4776083 (+)
G114382 NA other downstream 650339 6592224 ~ 6593564 (+)
G114389 NA other downstream 656461 6598346 ~ 6600180 (+)
G114388 NA other downstream 682382 6617328 ~ 6644816 (+)
CI01000020_06769551_06772924 NA other downstream 820002 6769310 ~ 6774074 (+)

Expression


Co-expression Network